Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g01023 ATGCCAAAGCGCGATATATCCGATTCCGAATCTGAAGGTACGAACGAGAATTCAAGCTCCGAGGAGGCTGAAGCTGGCACCCATTGTCATCCTCAATGTATTTCCGAGTATGAGAAACAGAGGCTCTCAAGAATTGCGGAGAACAGAGGAAGATTGGAGGCCCTAGGGTTGCCCAAAATGGCGTCCTCTTTGAAGCGTTCAGGTTACAGTGTTACCTACAATAACGGGAAAAAGAAGGCTGGGGACGATGAAGAATACGTGCCGGATGATGCTGAAGCGAGATTAAGTTCTTCGAGCGGAGAGGATGGGGTTGATGACGACGACGACGATGATGAGGATTTTGTTAGTGAAAAGGCTTCTCGGTCAAGGAAAAGGAAGGTGAAGAAAAGATGTTCAAAACCAAAAGTTAGAGTTTCAAGGAAGGATCCCTGGAATAATTCATATCACATTGATGGTGATGATGAATCTTTGAAGCAGGCAATTGCTCTTTCACTACAAGACTCTGCTGAAGGTTCGTTTTTTTCTGACAAGCATGTGGCGAGCGCTGCACATGTGGATACAAGGGGAAAGAATCACATAGAAGAAGATAAGGGGAAAAGGAAGAACAAAAAATCGTTTACTAGTCGGCTGCAAATGCCTGAGGATGAAGTCATTGTACACTTCTTTGAGATTGATGAAACCGGAAAAGGAAGTGTAACAATGAGGGATTTACAAAGAGTTGCTGCAGCTTATGATTTTGTGTGGACGGACAAGGAGTTATCTGACATGATCCACTGCTTTGATAGTGATAATGATGGAAAGCTAACCCTAGATGATTTCCGTAAGATTATTGATCGCTGCAACATGATCAAAGGGTCAGAAAAATCTCGATGGATTCAAGGAGGTCATTGA 891 0.4355 MPKRDISDSESEGTNENSSSEEAEAGTHCHPQCISEYEKQRLSRIAENRGRLEALGLPKMASSLKRSGYSVTYNNGKKKAGDDEEYVPDDAEARLSSSSGEDGVDDDDDDDEDFVSEKASRSRKRKVKKRCSKPKVRVSRKDPWNNSYHIDGDDESLKQAIALSLQDSAEGSFFSDKHVASAAHVDTRGKNHIEEDKGKRKNKKSFTSRLQMPEDEVIVHFFEIDETGKGSVTMRDLQRVAAAYDFVWTDKELSDMIHCFDSDNDGKLTLDDFRKIIDRCNMIKGSEKSRWIQGGH 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g01023 296 ProSitePatterns EF-hand calcium-binding domain. 261 273 IPR018247 -
Accr6g01023 296 ProSiteProfiles EF-hand calcium-binding domain profile. 248 283 IPR002048 GO:0005509
Accr6g01023 296 MobiDBLite consensus disorder prediction 1 32 - -
Accr6g01023 296 Pfam EF-hand domain pair 220 277 IPR002048 GO:0005509
Accr6g01023 296 MobiDBLite consensus disorder prediction 137 151 - -
Accr6g01023 296 SMART efh_1 216 244 IPR002048 GO:0005509
Accr6g01023 296 SMART efh_1 252 280 IPR002048 GO:0005509
Accr6g01023 296 MobiDBLite consensus disorder prediction 50 151 - -
Accr6g01023 296 SUPERFAMILY EF-hand 204 277 IPR011992 -
Accr6g01023 296 Gene3D - 202 293 - -
Accr6g01023 296 MobiDBLite consensus disorder prediction 121 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g01023 Accr-Chr6 28005626 28009748 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g01023 34 286 EF-hand Containing Proteins AT1G73440 39.764 1.35e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g01023 - - gmx:100806103 270.781