Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00628 ATGGATGTTAGTGAAGGAATTAAACGTGACTCGAAATTCCCCGCCTTTCCCTTTAAACCCTACTCCATCCAGATCGACTTCATGAACGCCCTCTATCAGTTTCTCGACCAAGGTGGCGTTTCCATGCTCGAAAGTCCCACCGGTACTGGGAAGACTATGAGTCTTATTTGTAGCGCTTTGCAATGGGTGCTTGATCGGAGGCAACAGCAGAAATCAGAAGAAGCAGGGCGAGGTTGTCGTGAAAATCAGGAAAATCATGGCGGGGGTTCAGATGATGAACCTGATTGGCTGAGAGACTTTGTTGTGGACAAAGAAAAGCAAGTCCAGTGTGAAAGAACAAGCAAGAAGAAGTACGGGTCTAGATTAGGCAAGCCTGATAAGAAGCATAACCGGGAAATTTATAAAGATTTTCATGTTATAGGTGAAGGTTCTCCTCCTGAAGAGGGGTGTGATAATTCGTATAAGAAAATTGATAAAGTGGATGTGGATGTTATTGATGAGGAATTCTTACCTGAGGAATATGAAAGTGAAGATGAAGATCTGGATAATGTAACTTCAAAGAGGAAGGCTTCTAATAGTGGTTTTGCTTTGTCCAGTGAAGAGGATGAATCTGAGGAGGAGGAAGAGGAGGAGGAAAAGAAGTTAAAGGTTTTTTTCTGTAGTCGAACTCATTCACAGCTATCGCAGTTCATAAAGGAATTAAGGAAAACAGTCTTTGCTGATGAGATGGACGTTGTTTGTTTAGGCTCCAGGAAAAATCTTTGCATTAACGAAGAAGTACTAAAACTTGGTAACTCCTCAAGCATAAATGAGCGATGCTTGGAACTCCAGAAAAAAAAGAAAAATGAACCAGCAAAAATTAAGAACGTAAGGGCAAGTACAGGAGTAAGGAGAACAAAGGCATTGTCTGGTTGCCCAATGCTTAGAAAGCATAGACTACAAAAAGAATTCAGGAATGAGGTATCTCAGGGAGGGGCCTTGGACATTGAAGATCTTGCTAAGTTGGGGAGAAATTTGGGAACTTGTCCTTATTATGGTTCTAGAAGCATGGTTTTGAGCGCTGATCTTGTGGTTCTACCATATCAGTCCCTTCTGTCAAAATCATCTCGTGAAGCACTTGGTTTGAATTTGAAATCCAATGTTGTCATTATAGATGAAGCTCATAATTTAGCAGATTCGCTCATTAGCATGCATGACTCCAGAATTACTTTAGCACAGCTGGAAAATGTGCATTCCCATTTGGAGAGATACTTTGACAGATTCTGTAATCTTCTGGGACCTGGTAACCGGAGATATATTCAAACTATAATGGTCCTCACTCGAGCTTTCCTGAGAGTGCTAAACAATGAGAGTGCAAATCTCTTAGATTCTTGCCAAGATATAGAAAAGGCTTTTCAGGAAAGTAGAGCCTCTGAATTTAGCATGTCCGTCAATGATTTCATCTTTGAACTAAATGTAGACAATGTCAACTTGATTAAGCTGGTGAAGTACATCAAGGAAAGCAAAATCATGCACAAGGTTTCCAGTTACGGAGAAAAGGTAACCAACTTGGAGAAGATTTCAGCTATCACTAAACTCGGAGAACATTATGAAGATGGAAGCACTCAGTCTGCGTTCCAGTCATTAGCTGACATGTTGCTATCACTGACAAACAATGACAATGATGGAAGGATAATCATTTCCAAGTCTAGAACAATGGGCCCCAGGAAACAAGGAGGGTATATTAAATATGTTATGCTCAGTGGAGAGAAGATATTTTCTGAGATTGTGGACCAAGCACACGCTGTCCTATTAGTTGGGGGAACTCTACAACCTATTGAAGAAACACGAGAGCGACTCTTTCCGTGGTTACCACAAAACCAGTTGCATTTATTTTCATGCGGTCATATTGTCCCTCCACAGAATATTATGCCAATTGCAGTTTCCCGTGGTCCTTCTGGCCGCTCCTTTGATTTCAGCTACAACTCAAGGAGCTCACCTGATACTATGCGGGAGCTAGGCCTTCTCCTCTGTAATTTGGTAACCATAGTTAGTGAAGGAATTGTTGTTTTCTTCTCATCTTTTGATTATGAAGCAAAAGTCTATGAAGCCTGGGAATCTTCTGGCATCCTGGATAGAATTACAAAGAGGAAGCGTATATTTAGAGAGCCTAGAAATAATACAGACATTGAATCTGTTCTTAAAGAATATAAAGAAACAGTTTGCCCATCATCGAGTATGAATTCAAACGGAAACCCAGCATCGCCGGGCGGTGCGGTTCTTCTAGCTGTTGTTGGTGGAAAGTTATCTGAAGGGATTAACTTAAGTGATGGGATGGGACGGTGCATAATCATGGTTGGACTGCCATATCCTAGTCCATCTGACATTGAGTTGCTGGAGAGGATAAAGCACATTGAAGGTTTTCGAAATTCAAACCCCATTGAAACTACTACTACATTTTCCACCAGTTATAATGTTTATAGTGGAGATATAAAAGGAGGTTTTGATATCTTAAGAAGTTGCAGTCACAGAGGAAAGGAATATTATGAGAATCTCTGCATGAAAGCTGTAAATCAATCAATAGGTAGAGCAATCCGTCACATGCATGACTATGCAGCAATTTTGTTGGTCGACACGAGGTATGCATCTGATTCCTCAAAGAGGAGTTTTTCTCATCCAGTCAACAAGCTCCCACAATGGATAAAGGATCGTTTGGTTTCGTCTACTAATAACTATGGTGAAGTCCATAGGTTAGTGCATCAGTTTTTTAAGTTGGACAGAAGGGTTTGTCAATAA 2775 0.4076 MDVSEGIKRDSKFPAFPFKPYSIQIDFMNALYQFLDQGGVSMLESPTGTGKTMSLICSALQWVLDRRQQQKSEEAGRGCRENQENHGGGSDDEPDWLRDFVVDKEKQVQCERTSKKKYGSRLGKPDKKHNREIYKDFHVIGEGSPPEEGCDNSYKKIDKVDVDVIDEEFLPEEYESEDEDLDNVTSKRKASNSGFALSSEEDESEEEEEEEEKKLKVFFCSRTHSQLSQFIKELRKTVFADEMDVVCLGSRKNLCINEEVLKLGNSSSINERCLELQKKKKNEPAKIKNVRASTGVRRTKALSGCPMLRKHRLQKEFRNEVSQGGALDIEDLAKLGRNLGTCPYYGSRSMVLSADLVVLPYQSLLSKSSREALGLNLKSNVVIIDEAHNLADSLISMHDSRITLAQLENVHSHLERYFDRFCNLLGPGNRRYIQTIMVLTRAFLRVLNNESANLLDSCQDIEKAFQESRASEFSMSVNDFIFELNVDNVNLIKLVKYIKESKIMHKVSSYGEKVTNLEKISAITKLGEHYEDGSTQSAFQSLADMLLSLTNNDNDGRIIISKSRTMGPRKQGGYIKYVMLSGEKIFSEIVDQAHAVLLVGGTLQPIEETRERLFPWLPQNQLHLFSCGHIVPPQNIMPIAVSRGPSGRSFDFSYNSRSSPDTMRELGLLLCNLVTIVSEGIVVFFSSFDYEAKVYEAWESSGILDRITKRKRIFREPRNNTDIESVLKEYKETVCPSSSMNSNGNPASPGGAVLLAVVGGKLSEGINLSDGMGRCIIMVGLPYPSPSDIELLERIKHIEGFRNSNPIETTTTFSTSYNVYSGDIKGGFDILRSCSHRGKEYYENLCMKAVNQSIGRAIRHMHDYAAILLVDTRYASDSSKRSFSHPVNKLPQWIKDRLVSSTNNYGEVHRLVHQFFKLDRRVCQ 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00628 924 Gene3D - 194 437 IPR027417 -
Accr6g00628 924 FunFam RAD3-like DNA-binding helicase protein 17 77 - -
Accr6g00628 924 SMART Cxpdneu3 688 876 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Accr6g00628 924 Pfam Helicase C-terminal domain 670 887 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Accr6g00628 924 MobiDBLite consensus disorder prediction 72 95 - -
Accr6g00628 924 Pfam DEAD_2 219 407 IPR010614 GO:0003677|GO:0003678|GO:0005524
Accr6g00628 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 402 IPR027417 -
Accr6g00628 924 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 13 917 IPR045028 -
Accr6g00628 924 NCBIfam DNA repair helicase (rad3) 202 905 IPR013020 GO:0003678
Accr6g00628 924 Gene3D - 17 74 IPR027417 -
Accr6g00628 924 MobiDBLite consensus disorder prediction 169 208 - -
Accr6g00628 924 Coils Coil 444 464 - -
Accr6g00628 924 Gene3D - 648 889 IPR027417 -
Accr6g00628 924 SMART ultradead3 16 468 IPR014001 -
Accr6g00628 924 CDD SF2_C_XPD 635 874 - -
Accr6g00628 924 SMART deadxpd 12 429 IPR006554 GO:0003678|GO:0016818
Accr6g00628 924 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 10 436 IPR014013 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00628 Accr-Chr6 12142702 12147426 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00628 K11273 - gmx:106794132 1295.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00628 6 12142702 12147426 Accr6g00628 6 12142702 12147426 ECH