LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr6g00605	ATGGTAGAGCAAGAAGGATACATGTCGAAGCTTTTCAATTTCAAAGGGAGGCAGCAACACAAGAAGAGCTCTAGCGTTCCGACTGGAGGCATTTCAGAACCTCCAAGAGAGGAAGAAGATTCATTTACTTCAAGAAGCCAAGAAACATACCCTCCCAACAATGAAGAGTCTCCTTCTGATCAAAATGGAGGAGACCTTGATAATAAGCCAAGCTCAACCATTGAAGAAGAAGATGCAGCTGTCAAAGAAATCGGAGATAACCTACTCCAAGAAATAGAACAGATGAAGGAGAAATTTGCAAAACTGTTACTGGGTGAGGATATGTCTGGTAAAGGAACTGGTGTTTCCTCTGCTTTGGCTCTCTCTAATGCATTCACAAATCTAGCTGCTGCTGTGTTTGGTGAACAGAAACGATTAGAAAAAATGCCACCAGAGAGAAAATCAAGATGGAGAAAAGAAATTGATTGGCTTCTTTCTGTTACTGAGTATATAGTTGAAATGGTTCCATCACATCAAACAGCTGATGATGGCTCCCAAATGGAGATTATGACGACAAAACAAAGATCTGATCTCCTCATGAACATACCTGCGTTGAGAAAGCTTGATGCTATGCTTCTTGATTGCCTGGACAATTTTGAAGGCCAAAGCGAGTTCCACTATGTATCAAAGGATACAGAGGATGAAAGCTCCAAGAGAAAAGATGATGACAAGTGGTGGTTGCCCATACCTAAGGTTCCACCAGAAGGTTTATCTGAAAATTCAAGAAAATTTCTTCAGCACCAGAAAGATAGTGTCACCCAAGTTCTTAAAGCAGCCATGGCCATAAATGCTCAAGTTCTATCAGAAATGGAGGTCCCAGAAAATTACATTGAATCCCTTCCAAAGAATGGGAGGGCGAGTCTAGGGGATTCAAACTACAGAAGTATTACTGTAGAGCATTTTGATCCTGATCAGTTTCTGATAACCATGGATCTATCATCAGAGCATAAAATCTTGGACCTCAAGAACAAAATAGAGGCCTCCATAGAGATTTGGAAGAGGAAAATGAACCATAAAGATGGGAAATCAGGCTGGGGTTCTGCTGTGAGTTTGGAAAAAAGAGAACTTTTTGAAGAGAGAGCAGAAACCATCTTGCTTTTCTTGAAGCAGCGTTTCCCTGGTCTTCCTCAATCTTCTTTAGATATCAGCAAAATCCAGTTCAACAGGGATGTAGGGCATGCAGTTCTTGAGAGCTATTCAAGAGTACTAGAAAGTTTGGCATACACAGTTCTCTCAAGAATAGATGATGTACTCCATGCAGATTATCAAACTCAAAACCTGTCGAAAAACGCGAAGAAAAGCGCTCTAAGAGGCACTTCCAAGTCACCGGCCCCGACTCCGACAAAACAAGAGTTAGATGTGAGTGCAGGAGGAGAAACACCTGCTACAATGACACTTTCAGATTTCATGCGTTTGGAAGGTGATACAGGCGACTGGGACATGAAGAAGGACTCTCAAGCTGTTATAGATGACTTGTTCAAAGACACAAATGGAAAAATGCAGAAACTTTTCAACATAGACACCAAAAAGAGGGTTTCTTACCTTCAGAGCTTGGGCGGCATGAGGAGCCCAACATCACGCCATTGA	1626	0.4182	MVEQEGYMSKLFNFKGRQQHKKSSSVPTGGISEPPREEEDSFTSRSQETYPPNNEESPSDQNGGDLDNKPSSTIEEEDAAVKEIGDNLLQEIEQMKEKFAKLLLGEDMSGKGTGVSSALALSNAFTNLAAAVFGEQKRLEKMPPERKSRWRKEIDWLLSVTEYIVEMVPSHQTADDGSQMEIMTTKQRSDLLMNIPALRKLDAMLLDCLDNFEGQSEFHYVSKDTEDESSKRKDDDKWWLPIPKVPPEGLSENSRKFLQHQKDSVTQVLKAAMAINAQVLSEMEVPENYIESLPKNGRASLGDSNYRSITVEHFDPDQFLITMDLSSEHKILDLKNKIEASIEIWKRKMNHKDGKSGWGSAVSLEKRELFEERAETILLFLKQRFPGLPQSSLDISKIQFNRDVGHAVLESYSRVLESLAYTVLSRIDDVLHADYQTQNLSKNAKKSALRGTSKSPAPTPTKQELDVSAGGETPATMTLSDFMRLEGDTGDWDMKKDSQAVIDDLFKDTNGKMQKLFNIDTKKRVSYLQSLGGMRSPTSRH	541

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr6g00605	541	PANTHER	ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1	28	503	IPR038937	GO:0005085
	Accr6g00605	541	Gene3D	PRONE domain, subdomain 1	96	434	-	-
	Accr6g00605	541	ProSiteProfiles	PRONE domain profile.	82	444	IPR005512	GO:0005085
	Accr6g00605	541	FunFam	Rop guanine nucleotide exchange factor 9	284	400	-	-
	Accr6g00605	541	FunFam	Rop guanine nucleotide exchange factor 14	86	314	-	-
	Accr6g00605	541	MobiDBLite	consensus disorder prediction	45	69	-	-
	Accr6g00605	541	Gene3D	PRONE domain, subdomain 2	284	400	-	-
	Accr6g00605	541	Pfam	PRONE (Plant-specific Rop nucleotide exchanger)	91	438	IPR005512	GO:0005085
	Accr6g00605	541	MobiDBLite	consensus disorder prediction	442	462	-	-
	Accr6g00605	541	FunFam	Rop guanine nucleotide exchange factor 14	316	443	-	-
	Accr6g00605	541	MobiDBLite	consensus disorder prediction	1	72	-	-
	Accr6g00605	541	MobiDBLite	consensus disorder prediction	442	472	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr6g00605	Accr-Chr6	11852868	11856013	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr6g00605	-		-	gmx:100781787	680.248