Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00597 ATGCGGGGACGACTTATTGATCCGTACAAGCGAATGGCATCCAAGGATCATATAATTTCTTGTGACAAAGAAGAAAATTCTGCACGTTTACTGAATGGAAAACCTTCTTGGAAGCGCTCATTGCAGCATGTATTAGTGGCTTCCATTTCTTCATTTTTATGCGGCTACCATCTTGTAGTAGTCAATGAAACCTTAGAGAGCATTTCTATAGACCTTGGATTTAGAGGGAATACCATGGCTGAAGGTCTTGTAGTAAGTACATGTTTGGGTGGTGCTTTTGTTGGATCTTTGTTCAGTGGGTGGGTTGCAGATGGGGTTGGACGTCGAAGGGCATTCCAGATATGTGCTTTGCCTATGATCATTGGGGCTTCAATGAGTGCAACAACAAAAAGCCTGTGGGGTATGCTTTTGGGAAGGTTATTTGTTGGCACTGGAATTGGACTTGGCCCACCTGTTGCAGCTCTTTATGTGGCAGAGGTGTCTCCCACAGCTGTAAGGGGTGCTTTTGGTAGCTTAACTCAAATTGCACAATGTTTTGGAGTTATGGGCGCTCTATTTATAGGATTCCCATCCAAAGAATTCGAGGGTTGGTGGCGGATTTGTTTCTGGGTATCTGCCATTCCTGCTGCAGTACTGGCCTTTCTCATGGAGTTCTGTGCTGAGAGTCCTCATTGGCTTTATAAGAGAGGAAGAAGCAATGAGGCTGAAGCAGAATATGAGAAGCTCTTGGGAGGGATACATGTGAAACCTGCAATGACAGAACTGTTAAGGACTGGCGGAGATGATGATGAGACTGATAAGGTGAAAATTTCAGAATTACTCTTTGGCCGTCATTTCAAAGTGATGTTCATTGGATCTACACTTTTTGCTTTACAGCAGCTATCTGGCATAAATGCTGTTTTTTATTTCTCTTCAACTGTCTTCAAAACTTTTGGTGTTCCATCTGGTGTTGCAAACACATGTGTAGGAATTTGCAATTTACTGGGGTCGGTTCTTGCAATGACTCTAATGGATAAACTTGGAAGGAAAGCGCTTCTCCTGTGGAGCTTTTTGAGCATGGGGGTGGCAATGGGAATCCAAGTCATTGCTGCAAGTTCTTTGGCATCAGGATCTGGAGCAATGTATTTATCTGTTGGTGGCATGTTGATGTTTGTCTTTACATACGCAGTTGGGACTGGTCCTGTACCATGTCTTCTCCTATCAGAAATATTTCCTAGCAGGATCAGGGCAAAGGCATTGGCAATTTGCTTGGCTGTACATTGGGTGTTTAATTTCTTCGTTGGTCTGTTATTTTTGCGCCTGCTGGAACAACTCGGGGCACAACTCCTGTATACTATTTTTGGAGCATTCTGTATGGTGGCAGTGATATTTGTGAAGAATTATGTTGTGGAAACGAAAGGGAGGTCACTCCAAGAAATTGAAGTTGCACTTCTTTCACAAGAAGCAGAATAA 1452 0.4325 MRGRLIDPYKRMASKDHIISCDKEENSARLLNGKPSWKRSLQHVLVASISSFLCGYHLVVVNETLESISIDLGFRGNTMAEGLVVSTCLGGAFVGSLFSGWVADGVGRRRAFQICALPMIIGASMSATTKSLWGMLLGRLFVGTGIGLGPPVAALYVAEVSPTAVRGAFGSLTQIAQCFGVMGALFIGFPSKEFEGWWRICFWVSAIPAAVLAFLMEFCAESPHWLYKRGRSNEAEAEYEKLLGGIHVKPAMTELLRTGGDDDETDKVKISELLFGRHFKVMFIGSTLFALQQLSGINAVFYFSSTVFKTFGVPSGVANTCVGICNLLGSVLAMTLMDKLGRKALLLWSFLSMGVAMGIQVIAASSLASGSGAMYLSVGGMLMFVFTYAVGTGPVPCLLLSEIFPSRIRAKALAICLAVHWVFNFFVGLLFLRLLEQLGAQLLYTIFGAFCMVAVIFVKNYVVETKGRSLQEIEVALLSQEAE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00597 483 CDD MFS_GLUT_like 46 464 - -
Accr6g00597 483 SUPERFAMILY MFS general substrate transporter 32 474 IPR036259 -
Accr6g00597 483 ProSitePatterns Sugar transport proteins signature 1. 99 116 IPR005829 GO:0016020|GO:0022857|GO:0055085
Accr6g00597 483 ProSiteProfiles Major facilitator superfamily (MFS) profile. 43 466 IPR020846 GO:0022857
Accr6g00597 483 Gene3D MFS general substrate transporter like domains 37 478 IPR036259 -
Accr6g00597 483 PRINTS Sugar transporter signature 51 61 IPR003663 GO:0016020|GO:0022857|GO:0055085
Accr6g00597 483 PRINTS Sugar transporter signature 292 302 IPR003663 GO:0016020|GO:0022857|GO:0055085
Accr6g00597 483 PRINTS Sugar transporter signature 401 413 IPR003663 GO:0016020|GO:0022857|GO:0055085
Accr6g00597 483 PRINTS Sugar transporter signature 136 155 IPR003663 GO:0016020|GO:0022857|GO:0055085
Accr6g00597 483 PRINTS Sugar transporter signature 378 399 IPR003663 GO:0016020|GO:0022857|GO:0055085
Accr6g00597 483 PANTHER SOLUTE CARRIER FAMILY 2 35 477 IPR045263 -
Accr6g00597 483 ProSitePatterns Sugar transport proteins signature 1. 333 349 IPR005829 GO:0016020|GO:0022857|GO:0055085
Accr6g00597 483 NCBIfam sugar porter family MFS transporter 43 473 IPR003663 GO:0016020|GO:0022857|GO:0055085
Accr6g00597 483 Pfam Sugar (and other) transporter 44 475 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00597 Accr-Chr6 11763662 11769725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00597 9 422 Organic Solute Cotransporters AT1G67300 66.430 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00597 - - qsa:O6P43_018171 716.457