Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00575 ATGGAATCGAGTCGAAGAGCGGTGGAATCGTACTGGAGGTCGCGGTTGATCGATTCTGCAACATCGGATGAAGATAAAGTCACTCCGGTGTATAAATTAGAAGAAGTTTGCGAACTTTTGCGGGCTTCGCATGTTAGTATTGTGAAGGAAATTTCGGAGTTCATCTTAAAACGATTGGAGCATAAGAGTCCAATTGTAAAGCAGAAGACTTTAAGATTGATCAAATATGCAGTTGGAAAGTCTGGTATTGAGTTTAGGAGGGAAATGCAGAGACATTCAGTCGCTGTTCGTCAGTTGTTTCACTACAAGGGACAGCCGGATCCATTGAAAGGTAATGCACTGAACAAGGCAGTGCAGGACAGCGCTCATGAGGCCATCTCTGCCATCTTTTCTGCAGAAGATGGCAAACCAACACCTGCTGAAGATCTTAACAGGCGGATAGAAGGGTTCGGGAATACAAACTTTGAAGCATCGTCGGAAGATAAGAAATCCTTCATCAGTGAGGTAGTTGGTCTTGGAAGTGCATCAATCAAGCAAGGACTTAGTAACTTAGCACAGGGACATTCAATCATGAAGAATAAAACTGGAACCCACAAGAGTCCAAATCTTCGAAGGTCATTAACAATTGAAACGGAAGATAGTGGCAGATATGAACCAGTTACTTATGGTAATGAAACTCAAAGTAGCCTTGGACATTCAAAGAATCAATCTAGTGGTTCTTGGAACCCAGACTCGAGAGTGGTTAAGATGGAAACATTGAATGATAATTCCAATGCCAGCCATTCAGAGAGTAAGACACGAGAGGATAGGTTGCTGGAGACAATTGTAACCTCAGGAGGTGTACGGCTACAGCCCACTCGAGATGCCCTTCAAGTTTTCCTAACAGAGGCCGCGAAGTTGGATGCCTTGTCTTTAAGTCATGCCCTTGAACTAAAGCTTCGATCTCCAATGTGGCAGGTTCGCATGAAAGCTATCTGTGTCCTTGAAGCCATCCTTAGGAAAAGGGATGATGACACTTTTTCACGTGTAGCATCATACTTCACTGAAAATAAAGATGTGGTTGTGAGATGCTCAGAATCTCCCCAAGCTTCGTTGAGGGAAAAGTCTAACAAGGTTATTGGTCTTCTTGGTGGAGGTCAGCCAAACAGCTCTCCATTTATTTCAGAGAAGTCTGTGAAGGAAGAGGCTGCTACTGTTACTGAGTTGCCCAACTTGATAGACACTGATGATTCCAAAGAGAATCTTGGAGGGGATGATTTTACAAAGACTACAATTGATCAGAATGTAGCAAATCTGGCACCATCCACACCTTTGGTTGATGATTTATTTGGAGATTTCAATGGTTCTGTTGAATCTAGTATTGAACAGAAAAATGACGATGACCCCTTTGCTGATGTATCTTTTCATACAAATGAAAATAAAGGACAAGCAGATGATCTCTTTTCAGGGATGACGGTTGGTGATAAACAGAGTGATAGTTTGACTCATGGGCTGGGAAGTATTAGTGAGCCAGAAGCTTTTGACATTTTTGCTTCCAAATCCACTCAAGCAAACCATGATCATATTAGTGATTTAATGTCTGGATTGTCTGTTAATGAAAATACATCAAGTACAATACAGAAAACAACATCGTCCACCTCACAATCCGAATCTTTATTGTCAGGCTTGAATAGTCAGTTTAGCCATCAAGCCCCAGATCATGCCTTAGGCAACATGTTGAACTCTCAATCAGTTGGCTTCAATGCTAATCCCATGTTTCCTACTGGCCATTTTCCATATAATGTGCAGCCTGGTATTATGTTGAACCATGCATATCCTTCTCAACCCCTTAATTATAGTGCCATGGGAAGTCTTTTGGCTCAGCAGCAGTTCCTGGCAACCATGGCTAATTTCCAGCACTTTAGTAATGTAAGCATGCAAGATGCAGGTTCTGCTCAGATTGCTGGAACCAGTGAAAGAATGCCAATGCCAGACATATTCCAACCAAATTTTCCTAATCAAGCTCCTACCTCAATGATTAGTAATTCGAAGAAAGAAGACACTAAAGCATTTGATTTCATCTCAGACCATATTGCTTCGGCTCGTGATACTAGGAAAGTGATTTGA 2106 0.4188 MESSRRAVESYWRSRLIDSATSDEDKVTPVYKLEEVCELLRASHVSIVKEISEFILKRLEHKSPIVKQKTLRLIKYAVGKSGIEFRREMQRHSVAVRQLFHYKGQPDPLKGNALNKAVQDSAHEAISAIFSAEDGKPTPAEDLNRRIEGFGNTNFEASSEDKKSFISEVVGLGSASIKQGLSNLAQGHSIMKNKTGTHKSPNLRRSLTIETEDSGRYEPVTYGNETQSSLGHSKNQSSGSWNPDSRVVKMETLNDNSNASHSESKTREDRLLETIVTSGGVRLQPTRDALQVFLTEAAKLDALSLSHALELKLRSPMWQVRMKAICVLEAILRKRDDDTFSRVASYFTENKDVVVRCSESPQASLREKSNKVIGLLGGGQPNSSPFISEKSVKEEAATVTELPNLIDTDDSKENLGGDDFTKTTIDQNVANLAPSTPLVDDLFGDFNGSVESSIEQKNDDDPFADVSFHTNENKGQADDLFSGMTVGDKQSDSLTHGLGSISEPEAFDIFASKSTQANHDHISDLMSGLSVNENTSSTIQKTTSSTSQSESLLSGLNSQFSHQAPDHALGNMLNSQSVGFNANPMFPTGHFPYNVQPGIMLNHAYPSQPLNYSAMGSLLAQQQFLATMANFQHFSNVSMQDAGSAQIAGTSERMPMPDIFQPNFPNQAPTSMISNSKKEDTKAFDFISDHIASARDTRKVI 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00575 701 SMART VHS_2 13 147 IPR002014 GO:0035091|GO:0043130
Accr6g00575 701 MobiDBLite consensus disorder prediction 475 496 - -
Accr6g00575 701 Gene3D - 2 138 IPR008942 -
Accr6g00575 701 MobiDBLite consensus disorder prediction 188 204 - -
Accr6g00575 701 CDD ENTH_like_Tepsin 13 131 IPR035802 -
Accr6g00575 701 ProSiteProfiles VHS domain profile. 20 89 IPR002014 GO:0035091|GO:0043130
Accr6g00575 701 MobiDBLite consensus disorder prediction 220 244 - -
Accr6g00575 701 MobiDBLite consensus disorder prediction 188 244 - -
Accr6g00575 701 PANTHER UNCHARACTERIZED 5 692 IPR039273 -
Accr6g00575 701 SUPERFAMILY ENTH/VHS domain 15 127 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00575 Accr-Chr6 11460040 11464463 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00575 - - gmx:100803368 1011.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00575 6 11460040 11464463 Accr6g00575 6 11460040 11464463 ECH