Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00559 ATGGAGGGCAACGTACCAGAAATAGCCAAGAGAGTATGGAACACGATTCGTATTGCCTACTTCATGCTCAGAAAAGGCATATGTAAGGGTAAAATTATGATGGACCTCAACATGATGCTCAAACGCCGCGGCAAGCTCGCCGGAAAGGCCATCTCTAACCTCAAGTTCCTCCACCACCACCACCACGGCAGCTCCACCTCCTCCGACAACCCCCACCTCCAGTTCTCCGCTGGACGCGAGTACGAGTTCAGCTGCAGCAACACACCCAACTTCACCTTCTTCCCAAAGCGCCACCACCGCCACAGCCACAATCCCTTCTTCTTCGCGTGTGCTCACGCGCCACTCACTCAGGACGACGACATGGTGGCTGCCGGTAATGCGCTCAAGGTGGCGTTGGAGATGTTAGATAACAACAATGCTTCGAACAATAACTATAACGGGGATATGGTGGAGGCATCGCCGGCGCTTCCCGGGTTCGGGAGGAGTCCGATGGTGAGGCAGCTGAGGGTGACGGACTCGCCCTTCCCCGTGCAAGAAGGCGACACTGATAGGGATCATCAGGTGGACAAGGCGGCGGAGGAGTTCATAGAAAGGTTTTACAAGGACCTGAAGAAGCAAGCTTGA 624 0.5497 MEGNVPEIAKRVWNTIRIAYFMLRKGICKGKIMMDLNMMLKRRGKLAGKAISNLKFLHHHHHGSSTSSDNPHLQFSAGREYEFSCSNTPNFTFFPKRHHRHSHNPFFFACAHAPLTQDDDMVAAGNALKVALEMLDNNNASNNNYNGDMVEASPALPGFGRSPMVRQLRVTDSPFPVQEGDTDRDHQVDKAAEEFIERFYKDLKKQA 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00559 207 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 8 206 - -
Accr6g00559 207 Pfam Cotton fibre expressed protein 186 206 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00559 Accr-Chr6 11001436 11002059 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00559 - - pcin:129289402 324.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00696 7 11373403 11373969 Accr6g00559 6 11001436 11002059 CCT
Accr6g00559 6 11001436 11002059 Accr7g00696 7 11373403 11373969 ECH
Accr1g00866 1 18915310 18915927 Accr6g00559 6 11001436 11002059 ECH
Accr6g00559 6 11001436 11002059 Accr6g00559 6 11001436 11002059 ECH