Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00549 ATGGCCTCTTACAGGCCTTTTCCTCCGCAATCATCGTATGGTCCACCTCCGAGTCAAAACCCTATAGCACCACCAGGACATCCACCTCAACAACAACGTGGAAATCAGTACAACCAAAGCTGGGGTTATGGTGGAGGTGATGGCAGTATGCCATCAGCTCCTTCTACTTCTTTTCCCCAAAACTACAACCAAATGCCCCAAAATTCTAATTATCATCATGGTGGATATGGATCATCTTCTTCACAGCCCTATGGAGCTCCAAGAAGTCAACAACCTCCTCCCCCTCCTCCTCCTTCCCATCAGCAGTTTCCATATCAGCCTCCACCTCCACCTCCGCCTGAAACTTCTTACCCGCCTCCACCTCCTCCTCCGCCACCAGCACCTTCAATGCCGCAACAAAATTCGACTAACTTGCAGCCTCCACCACATGCTCCTATGTATTATCCATCTGGTCAGTTCCCTCAGTATGACCAGCAGCCACCTCCACCTCCTTTGTCTCCGCCACCAAGTTCTTCCATCCCACCTCCACCTCCCCCAAGTTCACCACCTTCAGCTGCAGCTCCTCCACAAAATCAAATTAAGGATGAGAGGCGATTCCACGACCGCAATAAAGGGCCTATGCCATCTGGTAGGCGTGATCATGAGCATTCACAACATGGAATGCCTCATAAACAGCAGAAGCCTGCCGTTCCTGCAATACCACCGAAGAAATCAAATGTGCCTCCTGGGAGGATTGAGACAGAGGAGGAAAGGAGGTTGAGAAAAAAGAGAGAATTTGAGAAGCAAAGGCAGGAAGAAAAGCATAGGCAGCAGCTGAAGGAATCACAGAACAGTGTTCTGCAAAAGACCCAGATTCTGTCATCTGGGAAGGGGCATGGTTCAATTGTAGGCTCGCGGATGGGTGAAAAGAGAACTGCTCCGCTATTAAGCGGTGAGAGGATTGAAAATAGGTTGAAAAAGCCCACGACATTTTTGTGCAAGCTGAAATTCCGAAATGAGCTTCCAGATCCGTGTGCACAACCCAAGCTTATGGCATTCAAGAAAGAAAAAGATCAATATTCAAAGTATACTATCACATCTCTGGAGAAATTATATAAACCCAAACTCTTTGTGGAGCCTGATCTTGGGATACCTCTTGACCTGCTTGATCTCAGCGTTTACAATCCTTCCAGCGTCAGACCACCTCTTGCTCCAGAAGATGAAGAATTATTACGAGATGATGAAGCAGTAACCCCTGTTAAAAAAACAGGCATAAAAAGAAAGGACAGGCCTACCGATAAAGGTGTTGCTTGGCTTGTTAAAACACAATACATATCTCCTCTGAGCATGGAATCAACGAAACAGTCTTTAACTGAAAAACAAGCAAAAGAACTTCGAGAGATGAGGGGAGGCCACAATATTTTGGAAAATCTCAATGATAGGGAAAGACAAATCAAGGAAATTGAAGCGTCATTTGAAGCAGCTAAATTACCCCCTGTTCATGCAACTAATAAAAATTTGTATCCTGTTGAGGTTCTGCCTCTGCTGCCTGATTTTGAAAGATATGAGGACCCGTTTGTTGTTGCAGCATTTGATAGTGCTCCAACAGCTGATACAGAAATCTACAGTAAGTTGGATAAATCTGTTCGTGATGCCCACGAATCAAGGGCAATTATGAAAAGTTATTTTACAAATGGTCCAGATCAGGAAAATTCTGAGAAATTTCTGGGATACATGGTCCCAACACCTGGAGAGCTACCAAAGGATATGTATGATGAAAGTGAAGATATCTCATATTCTTGGGTTCGAGAATATCTCTGGGATGTTCGGGGAGACGATGCAGATGACCCGGCAACATACTTGGTTTCTTTTGATGAGTCAGAAGCACGATATTTGCCTCTTCCAATAAAACTTCTGTTGAGGAAAAAGAGGGCTAATGAGGGAAGATCTACTGATGAGGTTGAGCAATTTGCAGCACCTTCAAAAGTGACTGTAAGGCGAAGGCCAACCGTGGCTGCAATTGAACGGAAGGATTCTGTGGGTTATGCAAACATAAAGGGCAGTTCTTCAAAGAGAAGGGCTTTAGACATGGATGACGATCTGGAACAGCAACATAGAGTTGCTATGCACCAGGATAATTATCAGTCTAGTGGAGCGGAGGATGACTTGTCTGAATGA 2157 0.4511 MASYRPFPPQSSYGPPPSQNPIAPPGHPPQQQRGNQYNQSWGYGGGDGSMPSAPSTSFPQNYNQMPQNSNYHHGGYGSSSSQPYGAPRSQQPPPPPPPSHQQFPYQPPPPPPPETSYPPPPPPPPPAPSMPQQNSTNLQPPPHAPMYYPSGQFPQYDQQPPPPPLSPPPSSSIPPPPPPSSPPSAAAPPQNQIKDERRFHDRNKGPMPSGRRDHEHSQHGMPHKQQKPAVPAIPPKKSNVPPGRIETEEERRLRKKREFEKQRQEEKHRQQLKESQNSVLQKTQILSSGKGHGSIVGSRMGEKRTAPLLSGERIENRLKKPTTFLCKLKFRNELPDPCAQPKLMAFKKEKDQYSKYTITSLEKLYKPKLFVEPDLGIPLDLLDLSVYNPSSVRPPLAPEDEELLRDDEAVTPVKKTGIKRKDRPTDKGVAWLVKTQYISPLSMESTKQSLTEKQAKELREMRGGHNILENLNDRERQIKEIEASFEAAKLPPVHATNKNLYPVEVLPLLPDFERYEDPFVVAAFDSAPTADTEIYSKLDKSVRDAHESRAIMKSYFTNGPDQENSEKFLGYMVPTPGELPKDMYDESEDISYSWVREYLWDVRGDDADDPATYLVSFDESEARYLPLPIKLLLRKKRANEGRSTDEVEQFAAPSKVTVRRRPTVAAIERKDSVGYANIKGSSSKRRALDMDDDLEQQHRVAMHQDNYQSSGAEDDLSE 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00549 718 PANTHER RNA POLYMERASE II-ASSOCIATED FACTOR 1 HOMOLOG 295 715 IPR007133 GO:0006368|GO:0016570|GO:0016593
Accr6g00549 718 MobiDBLite consensus disorder prediction 242 273 - -
Accr6g00549 718 MobiDBLite consensus disorder prediction 9 28 - -
Accr6g00549 718 MobiDBLite consensus disorder prediction 87 131 - -
Accr6g00549 718 MobiDBLite consensus disorder prediction 274 291 - -
Accr6g00549 718 MobiDBLite consensus disorder prediction 1 307 - -
Accr6g00549 718 MobiDBLite consensus disorder prediction 193 222 - -
Accr6g00549 718 MobiDBLite consensus disorder prediction 29 86 - -
Accr6g00549 718 MobiDBLite consensus disorder prediction 678 718 - -
Accr6g00549 718 MobiDBLite consensus disorder prediction 701 718 - -
Accr6g00549 718 Pfam Paf1 324 684 IPR007133 GO:0006368|GO:0016570|GO:0016593
Accr6g00549 718 MobiDBLite consensus disorder prediction 155 186 - -
Accr6g00549 718 Coils Coil 245 265 - -
Accr6g00549 718 MobiDBLite consensus disorder prediction 684 700 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00549 K15174 - qsa:O6P43_027715 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00549 6 10753939 10758888 Accr6g00549 6 10753939 10758888 ECH