Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00542 ATGGGGAGGGTGGTTGTCGGAGGTATAGTGATAGGCGCGGCGTGCGCAGTGGCGGTTCTTCTGGTGCGCTGCCACATGAAGAAATCGCAACGGTGGGCCAGAGCGATGGCCATTTTGCAAGAGCTGGAGGAAAAATGCGCCACCCCCATCGGAAAGCTGAAACAGGTCGCCGATGCAATGACCGTGGAAATGCACGCCGGACTTGCCTCAGAAGGTGGAAGCAAGCTCAAGATGCTCATCACATATGTTGATAATCTTCCAACTGGGAATGAGGAAGGATTATTTTATGCATTGGACCTTGGAGGAACTAACTTTCGTGTGCTCCGAGTGCAATTGGGAGGGAAGGATGGCCGTGTTCTGAATCAAGAATTTACTGAGGTTTCAATTCCTACTAACTTAATGGTTGGGACAGCAGAGGAACTCTTTGACTATATTGCAGCAGAAGTTGCAAAATTTGTTGCCAATGAAGGTCAAGATTTTCAAGTTCCTCTTGGCAGACAAAGGGAATTAGGTTTTACCTTTTCATTCCCTGTAATGCAAACATCAATTGCTTCTGGAAACCTTATCAAGTGGACAAAAGGCTTCTCCATAGATGATGCGGTTGGCCACGATGTTGTGGCAGAATTGACAAAAGCCATTGAGAGAAAAGGTCTGGATATGCGTGTAACAGCTCTGGTCAATGATACAGTTGGGACATTAGCAGGAGGTCGATACACACAAAAAGATGTTGTGGCTGCTGTTATTTTAGGTACTGGAACCAATGCAGCTTATGTGGAGCATGCTCAAGCGATACCAAAATGGCATGGTCTTATGCCAAAATCTGGAGAAATGGTTATTAACATGGAGTGGGGAAACTTTCGTTCATCGCACCTTCCATTGACTGAATATGATCTTGCATTAGACGCCGCTAGTTTAAACCCTGGTGATCAGATTTTTGAGAAGTTAATTTCTGGTATGTATCTGGGAGAAATTGTTCGTCGAGTATTGCTTAAAATGGCTGATGAAGCTTGCTTATTTGGTGATACTATTCCTCCAAAATTGAAACATCAATTTATCCTGAGGACCCCAGATATGTCTGCAATGCACCATGATACATCTGCTAATCTCCAGGTGGTTGGAAACACACTGAAGAATGTCTTGGAGATATCAGATACCTCCCTGGAAGTGAGGAAGGTGGTTGTTCAGCTCTGCAACGTAGTTGCCACACGTGGTGCTCGTCTTGCAGCTGCAGGAATCTTGGGAATCTTGAAGAAACTCGGGAGAGACACCCTTGTGGATGGTGAGAATCAGAAGAGTGTGATCGCCATGGATGGCGGATTATACGAGCATTATGCAGAGTACAGCAAGTGCGTGGAGAACACCCTAAGCTTATTGCTCGGCGACGAAGTCTCAGAAACTATTTGCATTGAACAGACGAACGACGGTTCAGGCATTGGTGCAGCCCTTCTAGCTGCCTCTAATTCACAGTACCTTAATTGA 1479 0.4571 MGRVVVGGIVIGAACAVAVLLVRCHMKKSQRWARAMAILQELEEKCATPIGKLKQVADAMTVEMHAGLASEGGSKLKMLITYVDNLPTGNEEGLFYALDLGGTNFRVLRVQLGGKDGRVLNQEFTEVSIPTNLMVGTAEELFDYIAAEVAKFVANEGQDFQVPLGRQRELGFTFSFPVMQTSIASGNLIKWTKGFSIDDAVGHDVVAELTKAIERKGLDMRVTALVNDTVGTLAGGRYTQKDVVAAVILGTGTNAAYVEHAQAIPKWHGLMPKSGEMVINMEWGNFRSSHLPLTEYDLALDAASLNPGDQIFEKLISGMYLGEIVRRVLLKMADEACLFGDTIPPKLKHQFILRTPDMSAMHHDTSANLQVVGNTLKNVLEISDTSLEVRKVVVQLCNVVATRGARLAAAGILGILKKLGRDTLVDGENQKSVIAMDGGLYEHYAEYSKCVENTLSLLLGDEVSETICIEQTNDGSGIGAALLAASNSQYLN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00542 492 PRINTS Hexokinase family signature 245 259 - -
Accr6g00542 492 PRINTS Hexokinase family signature 222 238 - -
Accr6g00542 492 PRINTS Hexokinase family signature 393 415 - -
Accr6g00542 492 PRINTS Hexokinase family signature 470 486 - -
Accr6g00542 492 PRINTS Hexokinase family signature 310 332 - -
Accr6g00542 492 PRINTS Hexokinase family signature 96 112 - -
Accr6g00542 492 PRINTS Hexokinase family signature 170 195 - -
Accr6g00542 492 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Accr6g00542 492 Pfam Hexokinase 245 485 IPR022673 GO:0005524|GO:0005975|GO:0016773
Accr6g00542 492 Pfam Hexokinase 39 238 IPR022672 GO:0005524|GO:0005975|GO:0016773
Accr6g00542 492 Gene3D - 81 484 - -
Accr6g00542 492 ProSiteProfiles Hexokinase domain profile. 33 485 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Accr6g00542 492 SUPERFAMILY Actin-like ATPase domain 242 489 IPR043129 -
Accr6g00542 492 FunFam Phosphotransferase 219 473 - -
Accr6g00542 492 Gene3D - 59 473 - -
Accr6g00542 492 FunFam Phosphotransferase 81 249 - -
Accr6g00542 492 PANTHER HEXOKINASE 15 487 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Accr6g00542 492 SUPERFAMILY Actin-like ATPase domain 22 240 IPR043129 -
Accr6g00542 492 CDD NBD_sugar-kinase_HSP70_actin 97 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00542 Accr-Chr6 10663261 10668941 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00542 K00844 - qsa:O6P43_018221 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00542 6 10663261 10668941 Accr6g00542 6 10663261 10668941 ECH