Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00537 ATGAGCAACTCTGGGGGAATGATGGCTTTGTCGCAACCGTCTCAGTTGGCGGCTAAGCAATATGGTGTGACGAAGCCGATATCAAGGGCTGGGCCGACTGCGGCTGATTTACAAAGGACTTTGGAGCTAGAGAAGTTTCTGGTTCATTCAGGGCTGTATGAGAGCGAAGAGGAGGCTGCTAAGAGAGAGGAGGTCCTTCTTCGACTTGGACAGATAGTAAAGGATTGGGTGAAGCAACTGACTGGGCTAAGAGGATACACTGATCAAATGGTGGAAGAAGCTAATGCTGTCATATTCACATTTGGTTCTTATCGACTTGGGGTTCATGGTCCTGGGGCGGACATAGACACATTATGTATTGGGCCATCTTATGTGAACCGAGAGGCGGACTTTTTCTTTGTATTGCATGACATTCTGGCTAACATGGATGAGGTCTCTGAACTGCAACCGGTTCCAGATGCTCATGTACCGGTTATGAAATTCAAGTTTGATGGAATATCAATTGACCTACTTTATGCCAGTATATCTTGCTTGGTTGTGCCGGAAAACTTGGACATATCAGATGTTTCTGTCTTATACAATGTGGATGAGCCTACTGTTCGAAGTCTAAATGGATGTCGAGTTGCAGATCAAATTTTAAAGCTTGTTCCAAATGTTGAGCACTTTCGAACAACACTTCGGTGCTTAAAATTTTGGGCCAAAAGGCGAGGTGTTTATTCCAATGTGACTGGATTTCTTGGGGGTGTGAACTGGGCCATTCTTGTTGCTCGAGTGTGCCAGCTCTATCCAAATGCAGTTCCAAGTATGCTTGTCTCTCGATTCTTTCGGGTGTATACTCAGTGGCGTTGGCCAAATCCTGTCATGTTGTGCCCAATTGAGGAGAATGAGCTTGGATTTTCTGTTTGGGATCCTCGTAAAAAACCTTGTGACCGAACACATCGTATGCCCATCATTACTCCTGCTTATCCCTGTATGAATTCCAGTTACAATGTTTCAACGAGTACACTTCGTGTTATGATGGAACAGTTTCATTATGGCAATAAGATATGTGAGGAAATAGATCTGACTAAAGCTTGTTGGAGTCGTATGTTTGAGCCATACCTTTTCTTTGAGAGTTATAAAAACTATCTGCAAGTTGACATAGTAGCGGCTGACGCTGATGACTTGCGGACATGGAAGGGTTGGGTGGAATCTCGACTCCGGCAGCTGACTTTGATGATTGAGCGTGACACCCTTGGAAAGTTGCAGTGTCATCCTTATCCTCATGATTATGTGGATGCTTCTAAACAATGTGCACATTGTGCTTTCTTCATGGGCCTGCAGAGGAAGCAAGGGGAGACTGTTCAAGAAGGTCAACAGTTTGATATACGTGATACGGTTGATGAATTTCGGCATTCTGTTAATATGTACATGTTCTGGAGACCTGGGATGAAAATACATGTTTCTCATGTTCGTAGAAGGCAAATTCCATCTTATGTTTTACCTAATGGTTATAATAAGAGACCTCGACCATCAAAGCCAACCTCACAAGTAGAGGAACCTGTTAAATCATTTCATGTAACTGAGGTTTATGGGAGTGAACATGTTGATGGAACCCGTAAGAGGAAAAATGAGGACATGGCGGGTGAGAAGTATGATGTTATTGCAAAAAGGCTTTCTAGTAGTGCTGAGAGTCATGATCCAATTTCTTCAAACATATTGGATAAATCTGTGGATATCTTACGTAGCAGTACAAGAAACAGAATGTGCCTGTTTGAAGTGAATAGATTTGAAGTTCTGGCTTCCAATGGTTTTTCTGCTGATGCCATGTCTGATGCTCAAAAGGTGAGACCAGTGGAGAGCATTGAACTGTCCTACAGAGGGAAAAATGATTTGGATAAAGGAATAGCATCATCTGAACAAGAACCTGAATGTGCATCAAATTCTAGTGTAATTACATCTGCTACAAGTGATGGTGGTTCTTCAGATGATGCTGGGATTGAATCAGTGGCAGACTGTGCTGAGGATAACATGGTAGGAGTTGAGGGGACTGTGAGAGAGGGTGACGAGATGGGCTCTTTACAGGATGCTGCACGTGAGGGAGACCCTGTTGCACGTTTGGAGAATACAGTTACTAGTGCAAAAGGATTAATGCAAGTGAGCTTTGGAACAGTACGAGCAGGTAAGGTCTTGATTCCAGGGGCATAG 2187 0.4353 MSNSGGMMALSQPSQLAAKQYGVTKPISRAGPTAADLQRTLELEKFLVHSGLYESEEEAAKREEVLLRLGQIVKDWVKQLTGLRGYTDQMVEEANAVIFTFGSYRLGVHGPGADIDTLCIGPSYVNREADFFFVLHDILANMDEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPENLDISDVSVLYNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAILVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKKPCDRTHRMPIITPAYPCMNSSYNVSTSTLRVMMEQFHYGNKICEEIDLTKACWSRMFEPYLFFESYKNYLQVDIVAADADDLRTWKGWVESRLRQLTLMIERDTLGKLQCHPYPHDYVDASKQCAHCAFFMGLQRKQGETVQEGQQFDIRDTVDEFRHSVNMYMFWRPGMKIHVSHVRRRQIPSYVLPNGYNKRPRPSKPTSQVEEPVKSFHVTEVYGSEHVDGTRKRKNEDMAGEKYDVIAKRLSSSAESHDPISSNILDKSVDILRSSTRNRMCLFEVNRFEVLASNGFSADAMSDAQKVRPVESIELSYRGKNDLDKGIASSEQEPECASNSSVITSATSDGGSSDDAGIESVADCAEDNMVGVEGTVREGDEMGSLQDAAREGDPVARLENTVTSAKGLMQVSFGTVRAGKVLIPGA 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00537 728 FunFam Nuclear poly(A) polymerase 4 368 484 - -
Accr6g00537 728 Pfam Nucleotidyltransferase domain 95 171 IPR002934 GO:0016779
Accr6g00537 728 MobiDBLite consensus disorder prediction 495 514 - -
Accr6g00537 728 Gene3D Beta Polymerase, domain 2 54 210 IPR043519 -
Accr6g00537 728 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 369 494 IPR011068 GO:0003723|GO:0016779|GO:0031123
Accr6g00537 728 FunFam Putative poly(A) polymerase gamma 196 364 - -
Accr6g00537 728 PANTHER POLY A POLYMERASE 15 530 - -
Accr6g00537 728 SUPERFAMILY Nucleotidyltransferase 21 215 IPR043519 -
Accr6g00537 728 Gene3D Poly(A) polymerase predicted RNA binding domain 369 484 - -
Accr6g00537 728 FunFam Poly(A) polymerase alpha, putative 54 210 - -
Accr6g00537 728 Pfam Poly(A) polymerase predicted RNA binding domain 369 426 IPR007010 GO:0003723|GO:0043631
Accr6g00537 728 Gene3D - 22 364 - -
Accr6g00537 728 CDD NT_PAP_TUTase 61 216 - -
Accr6g00537 728 Pfam Poly(A) polymerase central domain 22 366 IPR007012 GO:0043631|GO:1990817
Accr6g00537 728 SUPERFAMILY PAP/OAS1 substrate-binding domain 217 366 - -
Accr6g00537 728 MobiDBLite consensus disorder prediction 626 660 - -
Accr6g00537 728 MobiDBLite consensus disorder prediction 634 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00537 Accr-Chr6 10653303 10657995 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00537 K14376 - qsa:O6P43_018222 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00537 6 10653303 10657995 Accr6g00537 6 10653303 10657995 ECH