Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00527 ATGCAAGGCTCTGTCATGAGAGTCCTCGGAACTATCTTCAACACTAAGCACCACCTACTTTACCCCATCGATATCAAACGCCTTGCAGCTCCTTCTCTCATTTCCTTTCGTTCCTTTCCAAAGCCTCGATTTTTTCGGTATCCCTATTCCGCAAGCAGTCATGGGATAGATTTAAGCCTTGGCATTGAAGCCCCAGAAGAACCCAAGACAAGTTTAAAAACTGAGTCCGTAGAAAGAAAAACATGGTCGCGACACGCTTATTTATTTCAAGCCTCTAGTGAAGGGCAGAATGATCGGTTGGACTCAGGGGATAAAGTTGAAGACCTTGGAAACCAAAGGGCAAATGCGACAGAGAATGAGGCGAGCTCGGTTCGAGGTAGCGAACAGGATGGAGGTATTCGAAGGAGAGTTGGGATCAAGAAAAAGGAAAAAGGAAAAACCCATTGGGTTTGCTCCAATTGTGGGTATACGGCTGCGCAATGGTACGGATTTTGTCGCTCGTGTAATAGGGCTTCCACGATGAAACTGTTTCGTGAGGTGAAACTCAGTGATTCTGGTAAAGTCAGTGGCTTTTCAGTTTCAGAAAATGTAGTGGGATCGTGGCTCCCTCAGCAGGCAGGTGAATTGCGTCCTTTGAAATTGACGGATGTGAACCGTGGAGTTAATCATCAAGAGTGGAGATTTCCTTTCTCTGGTCCTTTTGGACATGAAGTTTCAAGAGTGCTTGGAGGTGGTCTTGTGCCAGGCTCTTTGATCTTAGTTGGTGGTGATCCTGGTGTTGGGAAGAGTACACTCTTGCTGCAGATTGCTGCAATGATAGCAGAAGGGTGCAACAGTGATGAAGCAGCTCCAGTTGTATATGTATCTGGTGAAGAGAGTGTCGAGCAAATCGGTAACAGAGCAGATCGCCTTGGGATTGAATCAGAAATATATTTATACTCAAGTACTGATATTGAGGACATATTGGAGAAAACTCAGCATCTCTCTGCTCGAGCTGTAGTGGTCGATTCAATACAAACTGTTTATTTGAAAGGAATAGTTGGAAGTGCTGGAGGGGTTTCGCAGGTGAAGGAATGTACTTCTGCATTGCTGCGATATGCCAAGAAGACTAACACTGCGGTTTTTTTGATTGGGCATGTAACAAAATCTGGAGATATAGCAGGACCTCGTGTCTTGGAGCACATTGTTGATGTTGTTTTATATCTGGAAGGTGAGAAGTGCACTTCCCATCGTATGCTACGAGTGGTGAAAAATCGGTTTGGATCCGCTGATGAGCTTGGAGTCTTTGAGATGTCACAGTCAGGTCTCCGGGCTGCTTTAAATGCTAGTGAAATATTTCTAAGTGAGCAACACTTAGATTCAGATTTTTTAGCCGGGTTAGCCATTGCCGTTGTAATGGATGGATCTCGAGCTTTCCTTATTGAAATTCAGGCACTTTGTGTTTCTGGCTCAACAGTCTCAAGGCATGTTAATGGCATTCAACAAAGTAGAGCTGATATGATCATATCTGTACTTATAAAGCAAGCTGGACTTAGACTTCACGAAAATGCTGTGTTTTTAAACGTTGTTAGCGGATTTCAGTTGACTGAGACTGCTGGAGATCTGGCAATAGCGGCTGCGATTTGCAGCAGTTTCTTGGAATTCCCTCTTCCCAAGGGCATAGCATTCATTGGTGAGATAGGCCTTGCTGGTGAGCTTCGCACGGTTCCTGGAATGGATAAAAGGGTCAACACTTTGGCGAAATTGGGTTACATAATGTGTATTGTACCAAAGGAAGCAGGAAAAATGTTAGGAACGGATGGTTTTGGGAAGATGAAAATTGTTGGTTGCAAGAATCTGAAGGAGGTTATTAACACTGTTTTTAAAGAACGAGAGTGA 1878 0.4414 MQGSVMRVLGTIFNTKHHLLYPIDIKRLAAPSLISFRSFPKPRFFRYPYSASSHGIDLSLGIEAPEEPKTSLKTESVERKTWSRHAYLFQASSEGQNDRLDSGDKVEDLGNQRANATENEASSVRGSEQDGGIRRRVGIKKKEKGKTHWVCSNCGYTAAQWYGFCRSCNRASTMKLFREVKLSDSGKVSGFSVSENVVGSWLPQQAGELRPLKLTDVNRGVNHQEWRFPFSGPFGHEVSRVLGGGLVPGSLILVGGDPGVGKSTLLLQIAAMIAEGCNSDEAAPVVYVSGEESVEQIGNRADRLGIESEIYLYSSTDIEDILEKTQHLSARAVVVDSIQTVYLKGIVGSAGGVSQVKECTSALLRYAKKTNTAVFLIGHVTKSGDIAGPRVLEHIVDVVLYLEGEKCTSHRMLRVVKNRFGSADELGVFEMSQSGLRAALNASEIFLSEQHLDSDFLAGLAIAVVMDGSRAFLIEIQALCVSGSTVSRHVNGIQQSRADMIISVLIKQAGLRLHENAVFLNVVSGFQLTETAGDLAIAAAICSSFLEFPLPKGIAFIGEIGLAGELRTVPGMDKRVNTLAKLGYIMCIVPKEAGKMLGTDGFGKMKIVGCKNLKEVINTVFKERE 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00527 625 Pfam AAA domain 241 384 - -
Accr6g00527 625 Pfam Rubredoxin metal binding domain 149 174 IPR041166 -
Accr6g00527 625 PRINTS DNA repair protein radA signature 151 175 - -
Accr6g00527 625 PRINTS DNA repair protein radA signature 410 436 - -
Accr6g00527 625 PRINTS DNA repair protein radA signature 240 268 - -
Accr6g00527 625 PRINTS DNA repair protein radA signature 375 403 - -
Accr6g00527 625 PRINTS DNA repair protein radA signature 336 360 - -
Accr6g00527 625 PRINTS DNA repair protein radA signature 485 508 - -
Accr6g00527 625 FunFam DNA repair protein radA isogeny 455 624 - -
Accr6g00527 625 FunFam DNA repair protein RadA 228 437 - -
Accr6g00527 625 SMART AAA_5 248 406 IPR003593 GO:0016887
Accr6g00527 625 Gene3D - 457 625 IPR014721 -
Accr6g00527 625 ProSiteProfiles RecA family profile 1. 227 380 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Accr6g00527 625 MobiDBLite consensus disorder prediction 113 132 - -
Accr6g00527 625 Pfam Subunit ChlI of Mg-chelatase 502 592 - -
Accr6g00527 625 SUPERFAMILY Ribosomal protein S5 domain 2-like 417 622 IPR020568 -
Accr6g00527 625 Gene3D - 237 437 IPR027417 -
Accr6g00527 625 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 238 431 IPR027417 -
Accr6g00527 625 NCBIfam DNA repair protein RadA 144 616 IPR004504 GO:0003684|GO:0005524|GO:0006281
Accr6g00527 625 PANTHER DNA REPAIR PROTEIN RADA 94 623 - -
Accr6g00527 625 CDD RadA_SMS_N 149 437 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00527 K04485 - qsa:O6P43_027696 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00527 6 10424882 10434062 Accr6g00527 6 10424882 10434062 ECH