Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00510 ATGGGTTTCTTCAAGTGGGTCTGCTTGATCCTCTTGCTTTACCTCCTTGACGCAACACTCATCTTATCAGATTCAAACGATCAATTACCAGTAATTCCCTTTGGCTTTTTAGAATTTGCCAAAAAGCCAGAGGTTTTGAATTGGATGACTGACATTCGAAGAAAGATTCATGAGAACCCTGAACTGGGTTATGAGGAATTTAAGACCAGTGAGCTGATAAGAGAGAAATTGGATAAATTGGGTATCTCTTATAAATATCCAGTTGCAGTTACTGGTGTTATTGGCTTCATAGGTACCGGACACCCTCCTTTTGTTGCAATAAGAGCCGATATGGATGCTCTTGCTATGCAGGAAAAGGTGGAGTGGGAGCACAAAAGTAAAGTACCTGGAAAGATGCATGCTTGTGGACATGATGCTCATGTTGCTATGCTTCTTGGCGCTGCTAAGATCCTCAAAGAACATGAAAAAGAGATAAAAGGAACTGTTGTGCTTGTTTTCCAACCAGCAGAGGAAGGCGGTGCCGGGGCTAAGAAAGTCTTAGATGCTGGAGCTTTAGAAAATGTCTCTGCTATCTTTGGATTGCATATAGATCCCTCATTACCTATTGGTGAAGTGGGCTCTAGATCTGGTCCCTTTTTGGCAGGAAGTGGCTTCTTTGAAGCAGTAATTAGTGGAAAGGGAGGCCATGCAGCAATTCCCCAACATACAATAGACCCCATATTGGCTGCTTCTAATGTGATTGTTAGCTTGCAACATCTTGTTTCTCGCGAGGCTGATCCTCTGGACTCCCAGGTTGTGACGGTAGCAAAATTTCAAGGAGGCGGTGCATTCAATGTTATTCCTGATTCAGTCACAATTGGTGGCACCTTCCGAGCTTTTTCAAAAGAAAGTTTCATGCAACTGAGACAGCGGATTGAGCAGGTTATTACTGGGCAGGCTGCTGTGCAGAGGTGCAATGCAACTATTAGTTTTCTTGATAAACAGAAACCCTTCTTCCCTCCGACTGTTAATGATGGTGACCTGCACAAGCATTTTCAAAAAGTAGCTGGGGATTTGCTCGGGATTAGCAAAGTTACAGGTATGCCACCATCGATGGGATCTGAGGACTTTGCATTCTATCAAGAGAGTCTACCTGGTTACTTCTTCATGCTTGGAATGAAAGACGCTTCAGTTGAAAAGACTGTATCGGTACATTCGCCCTATTTCAAATTCAATGAAGATGCACTTCCTTATGGAGCTGCACTTCATGCATCATTAGCTGCTAGTTATCTTCTAAAGCTGCAGCAGAATGTGCCAGTAGTAGAGGGTAATCATCATGATGAATTATAA 1329 0.4304 MGFFKWVCLILLLYLLDATLILSDSNDQLPVIPFGFLEFAKKPEVLNWMTDIRRKIHENPELGYEEFKTSELIREKLDKLGISYKYPVAVTGVIGFIGTGHPPFVAIRADMDALAMQEKVEWEHKSKVPGKMHACGHDAHVAMLLGAAKILKEHEKEIKGTVVLVFQPAEEGGAGAKKVLDAGALENVSAIFGLHIDPSLPIGEVGSRSGPFLAGSGFFEAVISGKGGHAAIPQHTIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFQGGGAFNVIPDSVTIGGTFRAFSKESFMQLRQRIEQVITGQAAVQRCNATISFLDKQKPFFPPTVNDGDLHKHFQKVAGDLLGISKVTGMPPSMGSEDFAFYQESLPGYFFMLGMKDASVEKTVSVHSPYFKFNEDALPYGAALHASLAASYLLKLQQNVPVVEGNHHDEL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00510 442 PIRSF Amidohydrol_AmhX 37 428 IPR017439 GO:0016787
Accr6g00510 442 PANTHER PEPTIDASE M20 FAMILY MEMBER 35 431 IPR017439 GO:0016787
Accr6g00510 442 Gene3D Zn peptidases 49 409 - -
Accr6g00510 442 FunFam N-acetyldiaminopimelate deacetylase 214 332 - -
Accr6g00510 442 Pfam Peptidase family M20/M25/M40 106 420 IPR002933 GO:0016787
Accr6g00510 442 SUPERFAMILY Zn-dependent exopeptidases 44 424 - -
Accr6g00510 442 Gene3D - 214 332 - -
Accr6g00510 442 Pfam Peptidase dimerisation domain 215 311 IPR011650 -
Accr6g00510 442 CDD M20_IAA_Hyd 49 412 IPR044757 GO:0009850|GO:0016787
Accr6g00510 442 SUPERFAMILY Bacterial exopeptidase dimerisation domain 214 333 IPR036264 -
Accr6g00510 442 NCBIfam amidohydrolase 49 411 IPR017439 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00510 Accr-Chr6 10121638 10125900 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00510 K21604 - gmx:100794121 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g00644 7 9528760 9532884 Accr6g00510 6 10121638 10125900 CCT