Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00484 ATGGAGGCAAGCGAGGGTTGTTGTTCAATTCAGCTTATTGATGGAGATGGTGCATTCAATGTTGCCGGAATTGAACAATTTATCAAGGGGGTGAAATTGGGTGAATTTGGACTTTCATATGCTGTAGTTTCTATAATGGGTCCACAAAGTAGCGGTAAGAGCACTCTATTAAATCATTTGTTCAGAACTAACTTCAGGGAGATGGATGCTTTTAGGGGAAGGTCTCAAACCACTAAAGGAATTTGGATGGCTAGATGTGCTGGCTTGGAGCCCTGTACAATAGTGATGGATTTGGAGGGCACAGATGGAAGAGAACGTGGAGAGGATGATACTGCTTTTGAAAAGCAGAGTGCTCTATTTGCTCTTGCTGTTTCAGATATAGTGTTGATAAACATGTGGTGTCATGACATTGGGCGTGAGCAAGCTGCAAATAAACCTCTTTTGAAAACTGTCTTTCAGGTCATGATGAGATTGTTTAGTCCGCGCAAAACGACTTTGATGTTTGTCATCCGTGATAAAACAAGGACACCCCTTGAAAATTTAGAGCCTGTTTTACGAGAGGATATTCAAAAGATATGGGATTCTGTTCCCAAGCCGCAAGCTCACAAGGAAACCCCTCTAAGTGATTTTTTCAATGTCGAAGTTGTTGCTCTTTCTAGTTATGAAGAAAAGGAAGAGCAATTTAAGGAGCAGGTTGCTAGCTTGAGGCAACGATTCCATCAATCTATTGCACCTGGTGGACTTGCTGGGGATAGACGTGGAGTAGTTCCTGCTTCTGGATTTTCTTTCAGTGCACAGGAAATTTGGAAAGTCATTAAGGAGAACAAGGACCTTGACCTACCTGCGCACAAGGTCATGGTTGCTACTGTCCGCTGTGAAGAAATTGCAAATGAGAAATATGCTGTTTTTAGTACAAATGAGGAATGGTGTCGGTTGGAGGAGGCTGTGCAATCTGGCCTTGTTCCTGGATTTGGGAAAAGCCTCAATTCAATTCTTGACAATTGTCTTTCAGAGTATGATATAGAAGTCGCTTATTTTGATGAAGGTGTCAGATCTGCAAAACAAAAGCAGCTTCAAGAAAAACTGTTGCAACTTGTCCAACCAGCATTCCAATCTGCACTGGGACATGTAAGGTCTGGAACTTTGGATAAATTTAAAGAAGCATTTGACAAAGCTTTGAATGGAGGGGAAGGGTTTTCTGCTGCTACTAAAAACTGCGTTGAGTCTTATATGGCTCAGTTTGATGAAGCATGTGCAGATATTGTTGTTGAAAAAGCAAACTGGGATACATCTAAAGTGAGGGAGAAACTGCGTCGTGACATTGATGCACATGTCACTTCTGTTCGTGCGGCTAAACTGTCTGAATTGACGACATCATATCAGGAAAAATTGAAGGAGGCCTTAGCTGGACCTGTTGAAGCACTTCTAGATGAAGCTAACAGTGATACTTGGCCTGCAATAAGAAAACTTCTTTGGCGTGAAACTGAATCAGCTGTTTCAGGTTTCTCTGCTGCAATTTCTGGGTATGATATGGATGAACAAACACGACAAAACATGAGTACGAGTTTAGAGGACTATGCAAGAGGTGTGGTGGAAGCAAAGGCTAAGGAAGAAGCTGGAAGGGTTCTAATTCGTATGAAGGATAGGTTTACAACATTATTCAGCCGTGATTCTGATTCAATGCCTCGTATTTGGACGGGGAAGGAAGACATTCGAGCCATTACTAAGACATCCCGCTCTGCTTCCTTGAAGTTGCTGTCTGTTATGGCCGCAACTCGTTTGGATGATCAAGATGTTGATAATATTGAGAAAACATTATCATTTGCTCTGGACGATTCATCAGGAACTAATACTAAGGATAGGAGCATCACTGTGGTTGATCCACTGGCTTCAAGCACTTGGGAACAGGTTCCTTCCTCAAAAACATTGATCTCACCTGTACAGTGCAAATCATTATGGAGGCAATTTAAGATGGAGACAGAGTATCATGTCTCTCAGGCAATATCTGCGCAGGAGGCCAACAAGCGCAATAATAACTGGTTACCTCCTCCATGGGCAATTGTTGCTTTGGTTGTTCTGGGATTTAATGAATTTATGACCCTATTAAGAAACCCGTTGTATTTGGGTATTATCTTTGTTGGTTTTCTTCTTGTAAAAGCCCTATGGGTGCAGCTGGACGTATCTAATGAATTCAGCAATGGACTTCTACCGGGACTCATATCCTTGTCCACGAGATTTCTTCCAACTGTTATGAACATTGTCAGAAAACTAGCAGAGGAGGCTCAGAATCCTGCACCTAACAATGCACAGAGAAATCCATCAGGAAGCAATCAAAATGTTGTTACAGCTAGAAGCAATATGTCATCAAGTGCTTCTTCTAACGCAACTTTGTCCGAAAAAGCTTCGTCTAATGTAACTTCATTGGAAAATGGTTCTGAATACTCTAGTCCAACAAAAAATGAGTAG 2466 0.4177 MEASEGCCSIQLIDGDGAFNVAGIEQFIKGVKLGEFGLSYAVVSIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMARCAGLEPCTIVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSDFFNVEVVALSSYEEKEEQFKEQVASLRQRFHQSIAPGGLAGDRRGVVPASGFSFSAQEIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYAVFSTNEEWCRLEEAVQSGLVPGFGKSLNSILDNCLSEYDIEVAYFDEGVRSAKQKQLQEKLLQLVQPAFQSALGHVRSGTLDKFKEAFDKALNGGEGFSAATKNCVESYMAQFDEACADIVVEKANWDTSKVREKLRRDIDAHVTSVRAAKLSELTTSYQEKLKEALAGPVEALLDEANSDTWPAIRKLLWRETESAVSGFSAAISGYDMDEQTRQNMSTSLEDYARGVVEAKAKEEAGRVLIRMKDRFTTLFSRDSDSMPRIWTGKEDIRAITKTSRSASLKLLSVMAATRLDDQDVDNIEKTLSFALDDSSGTNTKDRSITVVDPLASSTWEQVPSSKTLISPVQCKSLWRQFKMETEYHVSQAISAQEANKRNNNWLPPPWAIVALVVLGFNEFMTLLRNPLYLGIIFVGFLLVKALWVQLDVSNEFSNGLLPGLISLSTRFLPTVMNIVRKLAEEAQNPAPNNAQRNPSGSNQNVVTARSNMSSSASSNATLSEKASSNVTSLENGSEYSSPTKNE 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00484 821 FunFam Protein ROOT HAIR DEFECTIVE 3 homolog 18 273 - -
Accr6g00484 821 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Accr6g00484 821 MobiDBLite consensus disorder prediction 763 821 - -
Accr6g00484 821 CDD GBP 37 239 - -
Accr6g00484 821 Gene3D - 25 246 IPR027417 -
Accr6g00484 821 Pfam Sey1 three-helix bundle domain 323 760 IPR046758 -
Accr6g00484 821 Hamap Protein SEY1 [SEY1]. 9 762 IPR008803 -
Accr6g00484 821 MobiDBLite consensus disorder prediction 762 821 - -
Accr6g00484 821 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Accr6g00484 821 Coils Coil 218 238 - -
Accr6g00484 821 PANTHER PROTEIN SEY1 5 794 IPR008803 -
Accr6g00484 821 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 249 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00484 K22698 - gmx:100777656 1320.06