Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00417 ATGGCGTCTCATGGCTTATGTCCATCGGTAAAGAACATTCTTCTTCTAGATTCTGAGGGGAAGCGTGTAGCAGTCAAATACTATTCAGATGACTGGCCAACAAACAATGCAAAATTAGCTTTTGAGAAGTTAGTATTCAATAAGACTGTGAAGACAAATGCTCGGACAGAAGCTGAGGTAACATTAATTGAGAATAATGTTGTTATATACAAGTTTGTACAAGACTTGCATTTCTTCGTCACTGGTGGTGATGATGAAAATGAGCTCATTTTGGCTTCAGTTCTTCAGGGTTTCTTTGATGCAGTCACCTATTTGTTGAGGAGCAATGTTGATAAAAGGGAGGCGCTTGAGAACTTGGATCTCATTCTTCTATGTCTTGATGAGATTGTTGATGGAGGGATGATACTTGAAACAAATGGATCCCTTATTGCCGAAAAGGTGACATCTCATAGCATTGATGCTGACGCCCCCTTATCTGAGCAGACATTAACTCAAGCATGGGCCACAGCTAGAGAACATTTGACAAGAACCCTCCTGAAATGA 543 0.4052 MASHGLCPSVKNILLLDSEGKRVAVKYYSDDWPTNNAKLAFEKLVFNKTVKTNARTEAEVTLIENNVVIYKFVQDLHFFVTGGDDENELILASVLQGFFDAVTYLLRSNVDKREALENLDLILLCLDEIVDGGMILETNGSLIAEKVTSHSIDADAPLSEQTLTQAWATAREHLTRTLLK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00417 180 PANTHER ZETA-COAT PROTEIN 7 179 IPR039652 GO:0006890|GO:0030126
Accr6g00417 180 CDD Zeta-COP 11 146 - -
Accr6g00417 180 Pfam Clathrin adaptor complex small chain 10 149 IPR022775 -
Accr6g00417 180 SUPERFAMILY SNARE-like 10 151 IPR011012 -
Accr6g00417 180 FunFam Coatomer subunit zeta-2 4 150 - -
Accr6g00417 180 Gene3D - 5 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00417 Accr-Chr6 8072239 8074386 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00417 K20472 - gmx:100775726 326.25