Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00382 ATGACGTCGACCGTCATTAGCTACACCATGGTCGTCACCGGTACCGGGGCCGACCACCTTAACATGGGCTCCAACTTCATCGGTTCTAAAGAACCTTCGTCTCCTTCTCCTTGGCTAGATGATCAAGTTGCAGAGAAAAGAGCACATGTTGCAGATATGAAAAGCATGAAGAAATATGAACGCCATGCTCCAAGAGAAGAAAATGGTGTCAGCAGATTAACATCTTCTGCCTCCTCGGCAACCCAACAACAACAATCATACGACTTTACCTTGGATTGGGTCGTAGAGAAGGGAATTCCAGAAGTATTTGTGCTTATGAATTTTGGGTTTGAGATCTTCCTTGTGAGTCTCACTGTTCATCCCATTCCTAATCTCACTTCTGAGCCTCTTCATTTCATCTGCAACTCTTGGGTTGATACATTCAACAACACACAACTCTTTCGTCTTTTCTTCATCAACAAGGCGTACCTGCCTAGTCAAACACCAGGACTAATAGGATTTCTCCGAAAACAAGAGCTGCAAGGTTTAAGAGGAGAAATAAGTGAAGTTCAAGATGCTGATGGAGTTCGCAAGGAATGGGATAGAATCTATGAGTATGCAACTTACAATGACTTGGGTGATGTTGATGCTAATCTAGATCTTGCTCGTCCAACTCTTGGAGGATCCACCCAATATCCCTACCCCCGTAGGCTCAGAACTGGAAGGGCCCCATCAAAAAATGATCCGAGCACTGAGAGTAGACTCCCTCCAGAAGATTCCTTTTCGATCTATGTTCCAAAAGATGATAGATTTGGTGATCAGAAGTTGTTTGAGTTCGTGCAACATTTTCCCAAATCATCAATGAACCTTATGAAATCATACATATCAGAGGCATTGGAGGCCTCAGGAAAAGAATTTGAAAGCTTTGAGCATGTTCTTAAAGTACTTTATCAAGATGGTTTCACCTTTAATGTGCCTAAAGCCGTACTAGATGCTATTGCTCAAGTGTTACCTATTCCAACTCCCCCAGATAATGGCAATCTGCTATTAAAGTTTCCAATTCCTAGTGTCATTCAAGATAATCTAGATGGATGGATGACGGATGAAGAATTTGCACGAGAGATGCTTGCTGGCGTGAATCCCGTTTTAATCTGCCTCCTTCAAGAGTTCCCCATAAAAAGCACGCTAGATATTAAACTCTACGGTGATCATACCTCTACCATAACAAGACAACACTTGCAGAAGAACATGAATGGACTCACGGTTTATGAGGCACTGAATTCCAAGAGATTATTCATATTAAATCACTATGATGCATTTATGCCATATTTGAGGAAGATCAATGGGACTTCTAGAAAGGCTTATGCAAGTAGGACAATCCTTTTCCTTCAAAATGATGGGACTTTGAAGCCACTTGCTATTGAGCTGAGCTTACCTCACCCTGATGGAGATCAATTTGGTGCTATTAGTAAAGTGTATCTTCCTGAAAAAGAAGATGTTGAGGGTACCATTTGGCTTTTGGCTAAAGCTTATGTAGTTGTCAATGACACAGGCTATCATCAACTAGTCAGTCACTGGCTAAATACTCATGCGGTGATGGAGCCATTTGTGCTTGCAACACACAGGCAACTCAGTCAACTTCACCCAATTCATAAACTTCTTCATCCTCACTTTCACGACACCTTGTTCATCAATGCACTTGCTCGCCAAAACTTAATCTCTGCAGAAGGAATCATAGAGGACTCATTCTTGCCTGGGAAATATTCCATGGAGATGTCCTCTGTGGTTTACAACAGTTGGAATTTCCTTGAACAAGCCTTACCTGCTGATCTCATCAAGAGAGGAATGGCAGTAGAGGATCCAAGTGCTACTCATGGCCTTCGCCTTTTGATAGAAGACTACCCTTATGCTGTTGATGGACTTCTGATATGGGATGCTCTGAAGACCTGGGTTCATGACTATGTCACTTATTACTATGAGTCAGATGAGATCCTTAAGCAGGACCCTGAGCTACAATCATGGTGGAAAGAACTAGTTGAAGTAGGTCATGGTGACCTAAAGGATAAGCCATGGTGGCCAAAAATGCAGACTCGTCAAGAGCTAATTCACTCTTGCACTATCATCATATGGATAGCTTCAGCTCTACATGCAGCTGTGAACTTTGGCCAGTACCCTTATGGAGGATATATCCTGAACCGTCCTACTTTAAGCAGAAGGTTGGTTCCTGAGAAGGGAACTGAAGAGTATGAAGAGATGGTGAAGAATCCAGAGCTAGCTTTCTTAAAAACAATCACACCAAAGTTTGAGACACTTCTTGATCTTTCAATTATAGAGATACTGTCTGGCCATACCACTGATGAGGTTTATCTTGGAACAAGGACTATCCCGTACTGGACATATGATAAGAAGGTGTTGGAAGATTTCAAGAAGTTTGGTGAAAGATTGGCTGAGATTGAGAAAAGTTTGATAAGGAGGAATGAAGATGGGACACTGAGAAATAGGATTGGTCCAGTGATGGTGCCTTACACTCTGCTTTATCCGAGCAGTGAACCAGGACTTACAGGCAGAGGAATTCCAAATAGTATCTCTATATGA 2574 0.4223 MTSTVISYTMVVTGTGADHLNMGSNFIGSKEPSSPSPWLDDQVAEKRAHVADMKSMKKYERHAPREENGVSRLTSSASSATQQQQSYDFTLDWVVEKGIPEVFVLMNFGFEIFLVSLTVHPIPNLTSEPLHFICNSWVDTFNNTQLFRLFFINKAYLPSQTPGLIGFLRKQELQGLRGEISEVQDADGVRKEWDRIYEYATYNDLGDVDANLDLARPTLGGSTQYPYPRRLRTGRAPSKNDPSTESRLPPEDSFSIYVPKDDRFGDQKLFEFVQHFPKSSMNLMKSYISEALEASGKEFESFEHVLKVLYQDGFTFNVPKAVLDAIAQVLPIPTPPDNGNLLLKFPIPSVIQDNLDGWMTDEEFAREMLAGVNPVLICLLQEFPIKSTLDIKLYGDHTSTITRQHLQKNMNGLTVYEALNSKRLFILNHYDAFMPYLRKINGTSRKAYASRTILFLQNDGTLKPLAIELSLPHPDGDQFGAISKVYLPEKEDVEGTIWLLAKAYVVVNDTGYHQLVSHWLNTHAVMEPFVLATHRQLSQLHPIHKLLHPHFHDTLFINALARQNLISAEGIIEDSFLPGKYSMEMSSVVYNSWNFLEQALPADLIKRGMAVEDPSATHGLRLLIEDYPYAVDGLLIWDALKTWVHDYVTYYYESDEILKQDPELQSWWKELVEVGHGDLKDKPWWPKMQTRQELIHSCTIIIWIASALHAAVNFGQYPYGGYILNRPTLSRRLVPEKGTEEYEEMVKNPELAFLKTITPKFETLLDLSIIEILSGHTTDEVYLGTRTIPYWTYDKKVLEDFKKFGERLAEIEKSLIRRNEDGTLRNRIGPVMVPYTLLYPSSEPGLTGRGIPNSISI 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00382 857 ProSitePatterns Lipoxygenases iron-binding region signature 2. 540 550 IPR020834 GO:0016702|GO:0046872
Accr6g00382 857 PRINTS Lipoxygenase signature 495 512 IPR013819 GO:0016702|GO:0046872
Accr6g00382 857 PRINTS Lipoxygenase signature 513 530 IPR013819 GO:0016702|GO:0046872
Accr6g00382 857 PRINTS Lipoxygenase signature 533 553 IPR013819 GO:0016702|GO:0046872
Accr6g00382 857 Gene3D - 492 856 - -
Accr6g00382 857 ProSitePatterns Lipoxygenases iron-binding region signature 1. 513 527 IPR020833 GO:0016702|GO:0046872
Accr6g00382 857 PRINTS Plant lipoxygenase signature 226 245 IPR001246 GO:0016491
Accr6g00382 857 PRINTS Plant lipoxygenase signature 448 472 IPR001246 GO:0016491
Accr6g00382 857 PRINTS Plant lipoxygenase signature 193 209 IPR001246 GO:0016491
Accr6g00382 857 PRINTS Plant lipoxygenase signature 382 401 IPR001246 GO:0016491
Accr6g00382 857 PRINTS Plant lipoxygenase signature 122 140 IPR001246 GO:0016491
Accr6g00382 857 PRINTS Plant lipoxygenase signature 770 784 IPR001246 GO:0016491
Accr6g00382 857 PRINTS Plant lipoxygenase signature 343 359 IPR001246 GO:0016491
Accr6g00382 857 Gene3D - 157 267 - -
Accr6g00382 857 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 67 156 IPR036392 GO:0005515
Accr6g00382 857 Gene3D - 356 489 - -
Accr6g00382 857 MobiDBLite consensus disorder prediction 58 79 - -
Accr6g00382 857 MobiDBLite consensus disorder prediction 219 254 - -
Accr6g00382 857 Gene3D PLAT/LH2 domain 48 156 - -
Accr6g00382 857 SUPERFAMILY Lipoxigenase 157 857 IPR036226 -
Accr6g00382 857 Gene3D - 268 355 IPR027433 -
Accr6g00382 857 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 155 857 IPR013819 GO:0016702|GO:0046872
Accr6g00382 857 PANTHER LIPOXYGENASE 78 857 IPR000907 GO:0016702|GO:0034440|GO:0046872
Accr6g00382 857 FunFam Lipoxygenase 357 490 - -
Accr6g00382 857 Pfam Lipoxygenase 168 840 IPR013819 GO:0016702|GO:0046872
Accr6g00382 857 FunFam Lipoxygenase 492 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00382 Accr-Chr6 6362438 6368471 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00382 75 857 Acyl Lipid Metabolism Gene Families AT1G55020 54.684 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00382 K15718 - csin:114259967 936.791