Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00380 ATGACGTCGAAGGTCATTAGCTACACCATGGTTGTCACCGGTCCTGGGGCCGACCACCTTATCATGGCTGGCAACTTTATCGGTTCTAAAGAACCTTCGCCTCCTTGGCTAGATGATCAAGTTGCAGTGAAAAAAGCACATGCTGCAGATCTGAAAAGCATGAAGAAATATGAACGCCATGCTCCAAGAAAAGAAAATGGTAACAGCAGATTAATATCTTCTGCCTCCTCGGGAACCCAACAACAACAATCATACGACTTTACCTTGGATTGGTTCGTAGAGAAGGGAATTCCAGAAGCATTTGTGCTTTTGCTTCTTGATTTTGAGATCTTCCTTGTGAGTCTCACTGTTCATCCCATTCCTAATCTCACTTCCGAGCCTCTTCATTTCATCTGCAACTCTTGGGTTGATACATTCAACAACACACAACTCACTCGTGTTTTCTTCATCAACAAGGCGTACCTGCCTAGTCAAACACCAGGACTAGTGGGATTGTACCGAAAAGGAGAGCTGGAAGGTTTAAGAGGAGAATTAAGTGAAGTTCAAGATGCTGATGGAGTTCGCAAGGAATGGGATAGAATCTATGAGTATGCTACTTACAATGACTTGGGTGATGTTGATGCAAATCCAGATCTTGCTCGTCCTACTCTTGGAGGATCCACCCAATATCCCTACCCCCGTAGGCTCAGAACTGGAAGAGCCCCATCAAAAATTGATCCGAGCACTGAGAGTAGACTCCCTCCAGAAGATTCCTTTTCGATCTATGTTCCAAAAGATGATAGATTTGGTGATCAGAAGTTGTTTGAGTTTGTGCAACATTTTCCCAAATCATCAATGAACCTTATGAAATCATACCTATCAGAGGCATTGGAGGCCTCAGGAAAAGAATTTGAAAGCTTTGAGCATGTTCTTAAAGTACTTTATCAAGATGGTTTCACCTTTAATGTGCCTAAAGCCGTACTTGATGCTATTGCCCAAGTGTTACCTATTCCAACTCCCCCAGATAATGGCAATCTGCTATTAAAGTTTCCAATTCCTAGCGTCATTCAAGATAATATAGATGGATGGATGACGGATGAAGAATTTGCACGAGAGATGCTTGCTGGTGTGAATCCCGTTTTAATCTGCCTCCTTCAAGAGTTCCCCATAAAAAGCACGCTAGATATTAAAATCTACGGTGATCATACCTCTACCATAACAAGACAACACTTGGAGAAGAACATGAATGGGCTCACGGTTTATGAGGCACTGAATTCCAAGAAATTATTCATATTAAATCACTATGATGCATTTATGCCATATTTGAGGAAGATCAATGGGACTTCTAGAAAGGCTTATGCAAGTGTTGAGGGTACCATTTGGCTTTTGGCTAAAGCTTATGTAGTTGTCAATGACACAGGCTATCATCAACTAGTCAGTCACTGGCTAAATACTCATGCTGTGATGGAGCCATTTGTGATTGCTACACACAGGCAACTAAGTCAACTTCACCCAATTCATAAACTTCTTCATCCTCATTTTCATGACACCTTGTTTATCAATGCACTTGCTCGCCAAAACTTAATCTCTGCAGAAGGAATCATAGAGGACTCATTCTTGCCAGGGAAATATTCCATGGAGATGTCCTCTGTGGTTTACAACAGTTGGAATTTCCTTGAACAAGCCTTACCTGCTGATCTCATCAAGAGAGGAATGGCAATAGAGGATCCAACTGCTCCTCATGGCCTTCGCCTTGTGGTGGAAGACTACCCTTATGCTGTCGATGGACTTCTGATATGGGATGCTTTGAAGACCTGGGTTCATGACTATGTCACTTATTACTATGAGTCAGATGAGATCCTTAAGCAGGACCCTGAGCTACAGTCATGGTGGAAAGAACTAGTAGAAGTAGGTCATGGTGACATAAAAGATGAGCCATGGTGGCCAAAAATGCAGACCCGTCAAGAGCTAATTCACTCTTGCACTATCATCATATGGATAGCTTCAGCCCTACATGCAGCTGTGAACTTCGGCCAGTACCCTTATGGAGGATATATCCTAAACCGTCCTACTTTAAGCAGAAGGTTAGTGCCTGAGAAGGAAACTGAAGAATATGAAGAGATGGAGAAGAATCCAGAGCTAGCTTTCTTAAAAACAATCACACCAAAGTTTGAGACACTTCTTGATCTTTCAATTATAGAGATATTGTCAGGCCACACCACTGATGAGGTTTATCTTGGAACAAGGACTATTCCTTACTGGACATATGATAAGAAGGTGTTGGAGGATTTCAAGAAGTTTGGAGAAAGGTTGGCTGAGATTGAGAAAAGGTTGGTAAGGAGGAATGAAGATGGGACACTGAGAAATAGGATTGGTCCAGTGATGGTGCCTTACACTCTGCTTTATCCGAGCAGTGAACCAGGACTTACAGGCAGAGGAATCCCCAATAGTATCTCTATATGA 2442 0.4238 MTSKVISYTMVVTGPGADHLIMAGNFIGSKEPSPPWLDDQVAVKKAHAADLKSMKKYERHAPRKENGNSRLISSASSGTQQQQSYDFTLDWFVEKGIPEAFVLLLLDFEIFLVSLTVHPIPNLTSEPLHFICNSWVDTFNNTQLTRVFFINKAYLPSQTPGLVGLYRKGELEGLRGELSEVQDADGVRKEWDRIYEYATYNDLGDVDANPDLARPTLGGSTQYPYPRRLRTGRAPSKIDPSTESRLPPEDSFSIYVPKDDRFGDQKLFEFVQHFPKSSMNLMKSYLSEALEASGKEFESFEHVLKVLYQDGFTFNVPKAVLDAIAQVLPIPTPPDNGNLLLKFPIPSVIQDNIDGWMTDEEFAREMLAGVNPVLICLLQEFPIKSTLDIKIYGDHTSTITRQHLEKNMNGLTVYEALNSKKLFILNHYDAFMPYLRKINGTSRKAYASVEGTIWLLAKAYVVVNDTGYHQLVSHWLNTHAVMEPFVIATHRQLSQLHPIHKLLHPHFHDTLFINALARQNLISAEGIIEDSFLPGKYSMEMSSVVYNSWNFLEQALPADLIKRGMAIEDPTAPHGLRLVVEDYPYAVDGLLIWDALKTWVHDYVTYYYESDEILKQDPELQSWWKELVEVGHGDIKDEPWWPKMQTRQELIHSCTIIIWIASALHAAVNFGQYPYGGYILNRPTLSRRLVPEKETEEYEEMEKNPELAFLKTITPKFETLLDLSIIEILSGHTTDEVYLGTRTIPYWTYDKKVLEDFKKFGERLAEIEKRLVRRNEDGTLRNRIGPVMVPYTLLYPSSEPGLTGRGIPNSISI 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00380 813 PRINTS Plant lipoxygenase signature 341 357 IPR001246 GO:0016491
Accr6g00380 813 PRINTS Plant lipoxygenase signature 224 243 IPR001246 GO:0016491
Accr6g00380 813 PRINTS Plant lipoxygenase signature 380 399 IPR001246 GO:0016491
Accr6g00380 813 PRINTS Plant lipoxygenase signature 726 740 IPR001246 GO:0016491
Accr6g00380 813 PRINTS Plant lipoxygenase signature 191 207 IPR001246 GO:0016491
Accr6g00380 813 PRINTS Plant lipoxygenase signature 120 138 IPR001246 GO:0016491
Accr6g00380 813 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 153 813 IPR013819 GO:0016702|GO:0046872
Accr6g00380 813 ProSitePatterns Lipoxygenases iron-binding region signature 1. 469 483 IPR020833 GO:0016702|GO:0046872
Accr6g00380 813 Gene3D - 450 812 - -
Accr6g00380 813 ProSitePatterns Lipoxygenases iron-binding region signature 2. 496 506 IPR020834 GO:0016702|GO:0046872
Accr6g00380 813 SUPERFAMILY Lipoxigenase 155 813 IPR036226 -
Accr6g00380 813 PRINTS Lipoxygenase signature 469 486 IPR013819 GO:0016702|GO:0046872
Accr6g00380 813 PRINTS Lipoxygenase signature 489 509 IPR013819 GO:0016702|GO:0046872
Accr6g00380 813 PRINTS Lipoxygenase signature 451 468 IPR013819 GO:0016702|GO:0046872
Accr6g00380 813 PANTHER LIPOXYGENASE 451 813 IPR000907 GO:0016702|GO:0034440|GO:0046872
Accr6g00380 813 MobiDBLite consensus disorder prediction 215 250 - -
Accr6g00380 813 MobiDBLite consensus disorder prediction 55 77 - -
Accr6g00380 813 FunFam Lipoxygenase 448 812 - -
Accr6g00380 813 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 67 154 IPR036392 GO:0005515
Accr6g00380 813 Gene3D - 285 372 IPR027433 -
Accr6g00380 813 Gene3D - 175 282 - -
Accr6g00380 813 Gene3D - 373 449 - -
Accr6g00380 813 Gene3D PLAT/LH2 domain 41 172 - -
Accr6g00380 813 Pfam Lipoxygenase 166 448 IPR013819 GO:0016702|GO:0046872
Accr6g00380 813 Pfam Lipoxygenase 448 796 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00380 Accr-Chr6 6303408 6309580 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00380 72 813 Acyl Lipid Metabolism Gene Families AT1G55020 51.772 0.0 801
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00380 K15718 - cave:132170278 845.114