Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00359 ATGAACATAGAGACTGCTCATGATCATGAAGTAGATAAAATGAGAGTTCTCTATGATGCTTCATATAAAGGCTGTGTTTCAACCTTGAATTCATTGCTTCAGGAAGACCCAGGATTGTTGTACAAAATTAGTTCACAAACTATCTTAATAGAAACTCCCTTGCACATATCAGCTTCCCATGGCCACCTCGATTTCACAAAAACCCTCCTTTCTCACAAGCCAGAACTTGCCCTTGAGAGAAACTATTCACAAAGCACACCTCTTCACTTAGCTTCTGCAGAAGGCCACGTCGACATTGTGAAGCAGCTGTTGGAAGCCCGTGAGGTGGCGTGCATGGTTGGTGACCAAGAAGGCAGAATTCCCTTGCACTATGCAGTTATAAGAGGCAGAAAAGATGTTGTGTTGGAGCTTATTAGAGCAAAGGCAGAGTCTTCGAAGATCCTTGATCACCTGGGGAAAACTATTTTCCACTTGTGTGTGACGTACAACCAGTTAGAGATCTTGAAAGAATTGGTGAACAAGTTGGATACTCATGGCACCCACGAGCTCCTAATTAAGGGAGACTTGGATGGCAAGAACACCATTCTGCATTTGGCTATCATGTTAAAACAAGTTGAGACTGTAATGTACCTCTTATCAATCCCAAAAGCAAAAGAATTGGTTAGATTGAAGAATGACATGGATCTCACTGCCTATGACATCCTGAAACGTAGTCCAAGAGATTTCAAAACTTTAGAAATACAAGTCATGCTGATGGAATATTCTGGAATCAGAACTGAAAATAACAGAATATCCCAAATTCGAAGGAAGAAGAAGAGAAACTGTTTGATAGGGATTTTGAAATGGATTGGAGGTTGGTTCAGACACAAAGGTGACTGGTTAGAAGAAATGAGAGGAAATTTGAGTTTAGTGTCTACCGTTATAGCCTCCATAACATTTCAATCATTAATAAACCCACCTGGTGGCCCCATCCAACAAGGCTTATCTGGCTTATCCAATGCACCCCTAAATTGCACTACGCTTTATGACAACGAGTCTTATTGTCCTGGTGAAGCAGTGTCATCTTTTCGTTTCCAAGGTAGTGCATTTTCGGAGTATGTAATTTGTAATACCATATCTTTCATGTCATCGCTTAGTGTCACCCTATTGCTTTTTAGTGGAGTTTCTATGAAGAACAAAGCTTTGATATGGCTTCTATCCATAGGCATGTGTGTTACTCTCACAACCTTAGCCCTTGCCTACGTATGTGCCCTTGCAATGGTGATGCCGCGCCATCTTCAGCAAAATAATGCGGTTTCGATGACCATTGAATCGGCAATCTTTGCCTGGTGTGGATTGCTTGGGCTCATTATGGTGTTAATCACGTTGCGCCTTATAATTTGGAGCGTGAAGAAATTTGTCAGAGCTATCAGAAAGTTTGTTCACAGGTGGAATTAG 1437 0.4141 MNIETAHDHEVDKMRVLYDASYKGCVSTLNSLLQEDPGLLYKISSQTILIETPLHISASHGHLDFTKTLLSHKPELALERNYSQSTPLHLASAEGHVDIVKQLLEAREVACMVGDQEGRIPLHYAVIRGRKDVVLELIRAKAESSKILDHLGKTIFHLCVTYNQLEILKELVNKLDTHGTHELLIKGDLDGKNTILHLAIMLKQVETVMYLLSIPKAKELVRLKNDMDLTAYDILKRSPRDFKTLEIQVMLMEYSGIRTENNRISQIRRKKKRNCLIGILKWIGGWFRHKGDWLEEMRGNLSLVSTVIASITFQSLINPPGGPIQQGLSGLSNAPLNCTTLYDNESYCPGEAVSSFRFQGSAFSEYVICNTISFMSSLSVTLLLFSGVSMKNKALIWLLSIGMCVTLTTLALAYVCALAMVMPRHLQQNNAVSMTIESAIFAWCGLLGLIMVLITLRLIIWSVKKFVRAIRKFVHRWN 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00359 478 SMART ANK_2a 191 220 IPR002110 GO:0005515
Accr6g00359 478 SMART ANK_2a 151 180 IPR002110 GO:0005515
Accr6g00359 478 SMART ANK_2a 83 111 IPR002110 GO:0005515
Accr6g00359 478 SMART ANK_2a 49 78 IPR002110 GO:0005515
Accr6g00359 478 SMART ANK_2a 12 41 IPR002110 GO:0005515
Accr6g00359 478 SMART ANK_2a 117 146 IPR002110 GO:0005515
Accr6g00359 478 ProSiteProfiles Ankyrin repeat region circular profile. 117 143 - -
Accr6g00359 478 Gene3D - 10 245 IPR036770 -
Accr6g00359 478 SUPERFAMILY Ankyrin repeat 17 237 IPR036770 -
Accr6g00359 478 Pfam Ankyrin repeats (3 copies) 117 174 IPR002110 GO:0005515
Accr6g00359 478 Pfam Ankyrin repeats (3 copies) 18 106 IPR002110 GO:0005515
Accr6g00359 478 ProSiteProfiles Ankyrin repeat profile. 117 143 IPR002110 GO:0005515
Accr6g00359 478 Pfam Domain of unknown function 292 420 IPR026961 -
Accr6g00359 478 ProSiteProfiles Ankyrin repeat region circular profile. 83 105 - -
Accr6g00359 478 ProSiteProfiles Ankyrin repeat profile. 83 105 IPR002110 GO:0005515
Accr6g00359 478 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 49 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00359 Accr-Chr6 5786783 5789305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00359 15 461 Miscellaneous Gene Families AT5G15500 26.068 1.69e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00359 - - pcin:129289554 498.434