Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00351 ATGGGAACTTCTCATGGTGAAGAGGAGAGATTGAGCCTTCTTTACGAAGCATCACGCAACGGGTCGGTAACAACTTTGAACTCACTGCTGAAACAAGAATCATTAATCCTCCACAAGATCTCACAAAGTGGCTTCTCTGAAACTCCTTTACACGTATCATCTTTGCTTGGCCACCTTGAATTTTCGAAAGCGCTTCTTACATACAAACCCAAACTGGCCATTGAGGTTGACGTTTCCCGAAACACACCTCTTCACTTGGCTTCTGCAGAAGGTCACATCGACATCGTGAAGGAACTGCTTAAAGTTAATAACAAGCCATGCTTGTTTCCTAATGAAGAGGGCAAAATTCCTTTGCACTATGCAGTTATGAGAGGGAGAACAGAGGTTGCCAGAGAGTTGGTTAAAGCGAAGCCGGAGTCTTTTAGCTTTCTTGATAATGGGTGCACAGTTTTTCACTTGTGTGTGATATACAATCATTTGGAAACTCTCAAAGGGTTGGTGGAATTGGAACTTGTCATTTCTGGAAAGCTTCTTTTCTCCACAAGTTCTGATGCAACGGGCAACACCATTTTCCATTTAGCAGTCTCGTCCAAGCAAGTTGAGACTATAAGGTACCTCTTATCAATCCCAAAAGCAATAGAATTGGCAAGCTTGAAGAATGACATGGGTCTCACTGCCTATGACATCTTGAAACGTAGTTCAAGAGATTTCAAAACCCTAGAGATACAAGTCATGCTAATGGAATATTCTGGAATCAGAACTGAAAATGACGGAATATTCCAAACTCATTCACACTCACCATCACCACAAGTTGCAAGACCTCGAATTCGAAGGAAGAAGAAAAGAAACTGTTTGATAAGGATTTTGAAATGGATTGGAGGTTGGTTCAGACACAAAGGTGACTGGGTAGAAGAAATGAGAGGAAATTTGAGTTTAGTGTCTACTGTTATAGCCACCATAACATTTCAGTCATTAATAAACCCACCTGGTGGCTCCATCCAACAAGGCTTATCTCAAGGCTCTCCCAATGAAGCCCTAAACTGCACTATGCTTTATAACAACGAGTCTTATTGTCCTGGTGAAGCAGTCTCATCTTTTCGTCTCCAAGATCAATTTTTGTGGTATGTAATATTTAATACCATCTCTTTCATTTCATCGCTTAGTGTCACCCTATTGCTTGTAAGTGGAGTTCCTATGAAGAACAAAGCTTTGATATGGCTTCTATCCATAGGCATGTGTGTTACCCTCACAACCCTAGCCCTTGCCTATTTATATGCCCTTAGAATGGTGATGCCAGACCATCTTCGGAAAAATAAAGCGTTTTCGATCACCATTGAAGCATCAATCTTGGCCTGGGCTGGATTGCTTGTGCTGATTATGGTGTTAATCACATTGCGCCTTATAATTTGGATCGTGAAGAAGTTTGTCAGAGCTATCAGAAAGTTGTTCACATTTGTAATTAGATAA 1467 0.4104 MGTSHGEEERLSLLYEASRNGSVTTLNSLLKQESLILHKISQSGFSETPLHVSSLLGHLEFSKALLTYKPKLAIEVDVSRNTPLHLASAEGHIDIVKELLKVNNKPCLFPNEEGKIPLHYAVMRGRTEVARELVKAKPESFSFLDNGCTVFHLCVIYNHLETLKGLVELELVISGKLLFSTSSDATGNTIFHLAVSSKQVETIRYLLSIPKAIELASLKNDMGLTAYDILKRSSRDFKTLEIQVMLMEYSGIRTENDGIFQTHSHSPSPQVARPRIRRKKKRNCLIRILKWIGGWFRHKGDWVEEMRGNLSLVSTVIATITFQSLINPPGGSIQQGLSQGSPNEALNCTMLYNNESYCPGEAVSSFRLQDQFLWYVIFNTISFISSLSVTLLLVSGVPMKNKALIWLLSIGMCVTLTTLALAYLYALRMVMPDHLRKNKAFSITIEASILAWAGLLVLIMVLITLRLIIWIVKKFVRAIRKLFTFVIR 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00351 488 ProSiteProfiles Ankyrin repeat profile. 113 135 IPR002110 GO:0005515
Accr6g00351 488 Pfam Domain of unknown function 301 428 IPR026961 -
Accr6g00351 488 SUPERFAMILY Ankyrin repeat 14 232 IPR036770 -
Accr6g00351 488 ProSiteProfiles Ankyrin repeat region circular profile. 113 135 - -
Accr6g00351 488 ProSiteProfiles Ankyrin repeat profile. 79 101 IPR002110 GO:0005515
Accr6g00351 488 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 11 463 - -
Accr6g00351 488 ProSiteProfiles Ankyrin repeat region circular profile. 79 101 - -
Accr6g00351 488 Gene3D - 3 242 IPR036770 -
Accr6g00351 488 Pfam Ankyrin repeats (3 copies) 14 101 IPR002110 GO:0005515
Accr6g00351 488 Pfam Ankyrin repeats (3 copies) 111 168 IPR002110 GO:0005515
Accr6g00351 488 SMART ANK_2a 79 108 IPR002110 GO:0005515
Accr6g00351 488 SMART ANK_2a 186 215 IPR002110 GO:0005515
Accr6g00351 488 SMART ANK_2a 9 39 IPR002110 GO:0005515
Accr6g00351 488 SMART ANK_2a 45 74 IPR002110 GO:0005515
Accr6g00351 488 SMART ANK_2a 146 175 IPR002110 GO:0005515
Accr6g00351 488 SMART ANK_2a 113 143 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00351 Accr-Chr6 5513351 5516230 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00351 14 470 Miscellaneous Gene Families AT5G15500 26.907 2.58e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00351 - - pcin:129289691 483.411