Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00350 ATGAGCGACCAAATGAGTGATCTCAGTGTTCTCTTTCGGGCAGCTGTTCTTGGTGATGAACAAGCTTTGCCGCAATGGTTAACAACACAGCCAGCTGATGAAACCACACAACCAGACACAGAAACAATCCTTGGCAACATTTTACGCACATCAGCACTGCTAGGTCATGTTCTCTTCACAGAGTTTCTTCTCAATCACAACCAAAAACTCGCCCTTAGTGCAGATTCTTCTGGAAGAACATCCCTTCACTTGACTTCTGCAGAGGGTAACTTGCTCATCGTGCGGAGGCTACTGTTATTGAATAATGAGCTATGCTTGGCTCGTGATGAAGAAGAAAGAATTCCTCTGCACTATGCAGCTATGAGAGGACGGACCGAGGTTGTGCAAGAGTTGATCTTAGCAAGGCCAGATTCTGTAAGTCTTGGTGATGGAGAAGAAAGAACTGTTTTTCATTTGTGTGTCATATACAACCATTTACAGACTCTCGAAACTTTGGTTAAATTGGACTATGCCTCGGTCAATATTGCGGCAGGCGAGCCTCGTCCTTACATCTTTCTGCGTCCTGATCGGGCTGGGGACACCATTCTCCATTTAGCTTCCAAGTTCAAGCGAGTTGAGGTGGTGAGGTATCTCCTGTCCATTCCAGAAATAAGAGGAATTGCAAATTTTAAGAACAACATAGGCTTCACAGCCCACCATATCCTCCAAGGACAAAGTCCAAAAGACTTCAAAATATGTGAAATATATCACATGTTGACAATGGTCAAAAGGGAAGAAAATTTTTGTAAGAAAATTTTTAGAGATTGGTTGAGGCATGGGGATGAATGGCTTGAAGAGATGAGGGGGAATCTGAGTCTAGTGTCTACCGTTATAGCAACTATAACCTTTCAAGCATTGATTAATCCACCTGGTAGCTTTATTCAACAAGGCTTATCATTACCATCAGAAGAAAATACCACCTCATCATCAAATCAAGTCCGCAATGCTGTCACTTCATCATCATATGATCTCAACTGCACCATCCTTCCTGATCATGGCACGTATTGTCCCGGACAAGCTATGGCATCATACTCCAATTTTCATCCTCATTTTGCGACGTATTTATTTCACGTTACGATCTCTTTTATTTCATCACTTAGTGTTACCCTCTTGCTCGTAAGTGGAATATTTCCTCTCAAGAATAAAGCTGTGATATGGATACTATCGATGGGCATGTGTATAACTCTCACATCGCTTGCAGCTGCATTCGTTAATGCCATGGTTATTATAATCCCAAGTCATCTTTGGAATGACAGATTTCTATCGCACTTAAAGGAGGTAAAATTGAACAGGGTTTGGGTTTATTTGATTCTGATAATAGTAGTGTTAATCTCACTACGCTTTTACGTCTGGGCACTGAAGAAGTCAAGAAGTTTATGGGCGAGAGAGAATGGATGTGGCAGATTTTTATCAGTGCCTTTAAGGATTATTTCTCTTTTAGTGACTCTTTTTGCTCCATTATTAGTTGTGGTTTTAGTTGCTTACTTTCTTACACTAGGTATGTATTAA 1548 0.4109 MSDQMSDLSVLFRAAVLGDEQALPQWLTTQPADETTQPDTETILGNILRTSALLGHVLFTEFLLNHNQKLALSADSSGRTSLHLTSAEGNLLIVRRLLLLNNELCLARDEEERIPLHYAAMRGRTEVVQELILARPDSVSLGDGEERTVFHLCVIYNHLQTLETLVKLDYASVNIAAGEPRPYIFLRPDRAGDTILHLASKFKRVEVVRYLLSIPEIRGIANFKNNIGFTAHHILQGQSPKDFKICEIYHMLTMVKREENFCKKIFRDWLRHGDEWLEEMRGNLSLVSTVIATITFQALINPPGSFIQQGLSLPSEENTTSSSNQVRNAVTSSSYDLNCTILPDHGTYCPGQAMASYSNFHPHFATYLFHVTISFISSLSVTLLLVSGIFPLKNKAVIWILSMGMCITLTSLAAAFVNAMVIIIPSHLWNDRFLSHLKEVKLNRVWVYLILIIVVLISLRFYVWALKKSRSLWARENGCGRFLSVPLRIISLLVTLFAPLLVVVLVAYFLTLGMY 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00350 515 Pfam Ankyrin repeats (3 copies) 116 212 IPR002110 GO:0005515
Accr6g00350 515 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 55 466 - -
Accr6g00350 515 Pfam Domain of unknown function 275 310 IPR026961 -
Accr6g00350 515 SUPERFAMILY Ankyrin repeat 7 233 IPR036770 -
Accr6g00350 515 ProSiteProfiles Ankyrin repeat profile. 191 213 IPR002110 GO:0005515
Accr6g00350 515 ProSiteProfiles Ankyrin repeat region circular profile. 191 213 - -
Accr6g00350 515 Gene3D - 2 252 IPR036770 -
Accr6g00350 515 ProSiteProfiles Ankyrin repeat region circular profile. 111 132 - -
Accr6g00350 515 SMART ANK_2a 145 175 IPR002110 GO:0005515
Accr6g00350 515 SMART ANK_2a 111 141 IPR002110 GO:0005515
Accr6g00350 515 SMART ANK_2a 191 220 IPR002110 GO:0005515
Accr6g00350 515 SMART ANK_2a 77 106 IPR002110 GO:0005515
Accr6g00350 515 ProSiteProfiles Ankyrin repeat profile. 111 132 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00350 Accr-Chr6 5497887 5499914 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00350 48 318 Miscellaneous Gene Families AT4G10720 24.150 8.57e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00350 - - pcin:129289691 372.089