Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00306 ATGACGGTGTCTACTATTGCTTTATGCGCTAGCCCCCCAAGCAGTGTGTGTTCTACTGCGCACCCTTGCCATATCAACGCCCATGCATCATACGATTTCGACTTGGGTTCACGATCGTCGTCGTCGTCTTCCACGACGGCGTTGCCATCTCAAAAACAAGGAATGAGTGGCCTCTCGTGTTTATTCTCTTCGCCGACTGTGAAGCATGTTCCTCTGTCGAGCTTTACCGTTGGCGGAGAGGAATTGGGTCCTTTATCTGAATTGAAGGAATTGAGCAGCTCCTTTTCCTATTCACCTAGCAGATTTGTTGGGTCCTCTTGGAAAAGAGATCAGAGCCCTGTTTCGGTTTTCCAAGGACCCGTTTCATGTAGTAGCAGTAGCGTTTCTGGTTCCGCAAGGACCTCCCCAATGAGGATCGGAGGCGATAGCTCGATTCGATTTAGGGACAGTGGATTGTTAGATGGCTTTGTCAGAAATTCATTAGGTTCGTGCTTGGATTACAATTCGCCAAGTTTCGAGCTGCATGGTGGTGACATAGCCGATGAACTGACCTTCAATTTGGAGGATTCTTTTGTGGGGGTAAATTTCGAGCAGTACGCTAGAGAATTGCTTGTGGGTGCCCAGTTAAAGCACAAGATCTTTTGTGAAGAATTTGTTATCAAGGCTTTCTGTGAAGCCGAGAAAGCGCACAGAGGGCAGATGCGAGCTTCTGGTGATCCATATTTGCAGCATTGTGTTGAAACAGCGGTTCTTCTTGCTTTGATTGGTGCTAATTCCACAGTTGTGGCTGCTGGGCTTTTGCACGACTCACTTGATGATTCCTTTCTGACTTATGATTACATCTTTGGGCTTTTTGGCGCTGGGGTTGCTGATTTAGTTGAAGGGGTTTCTAAGCTGAGTCACTTGAGCAAGCTTGCACGAGAGAATAATACGGCATGCAAATCAGTTGAGGCAGATCGGCTGCATACTATGTTCCTTGCTATGGTTGATGCAAGAGCTGTTCTCATCAAATTGGCTGATCGATTACATAATATGATGACACTAGATGCATTGCCAGTGGCCAAGCAGCAAAGGTTTGCGAAGGAGACCTTGGAGATTTTTGCTCCTTTGGCCAATCGATTGGGAATATCTAGTTGGAAGGAGCAATTGGAGAACTTGTGTTTTAAGCATCTCAATCCAGAAGAGCACCAGGAGATTTCTTCAAAGCTTGTGGAATCATGTGATGATGCAATGATTACTTCCGCGATAGAGAAATTAGAGCAAGCACTTAAAGATGAAGGCATTTCTTACCATGTCCTTTCTGGGCGGCACAAGAGCCTATATAGCATTTATTGCAAAATGCTGAAGAAGAAGCTAAGCATGAATGACATTCATGATATTTATGGGATGCGCTTGATCGTTGACAAGGAGGAGGACTGTTATAAAGCCTTGACAATTGTTCACCGGTTATGGTCTGAGGTACCTGGAAAGTTCAAGGACTACATTTGTCATCCTAAGTTCAATGGGTATAAATCTCTGCATACTGTTGTGATGGGTGAAGGAAAGGTTCCCCTTGAAGTACAAATCCGGACAAAAGAGATGCATTTGCAAGCAGAATTTGGATTTGCTGCTCATTGGAGATACAAGGAAGGCGATTGCCAGCACTCGTCATATGTGGTTCAGATGGTTGAGTGGGCTCGATGGGTTGTCACATGGCACTGTGAGACAATGAAAAAGGATTGTTCAGCTGTTGGATGTGCTGATTCGGTCAAGCCACCATGCAAGTTCCCTTCCCATGCTGACGATTGCCCACATTCTTACAAACCTCATTGTGGTCAGGATGGCCCTGTGTTCATCATCTTGATAGAGAACGATAAGATGTCTGTGCAGGAGTTTCCTGCAAACTCGATGGTGATGGACTTGCTGGAGAGAGTTGGGCGAGGAAGCTCAAAATGGACCCCATACAGATTTCCATTGAAAGAAGAACTGAGGCCAAGGCTGAATTATGAGCCTGTGAACGATCCAAAGTGTAAGTTGAATATGGGAGATGTGGTGGAGCTTACACCCGCCTTACCAGACAAGTCTCTGACAGAGTATAGGGAAGAAATCCAGCGTATGTATAATAGGGAGCTAACTGTACCTGCTTCAACTGGCATGGTTGGCTCTAGAAGCTGA 2154 0.4568 MTVSTIALCASPPSSVCSTAHPCHINAHASYDFDLGSRSSSSSSTTALPSQKQGMSGLSCLFSSPTVKHVPLSSFTVGGEELGPLSELKELSSSFSYSPSRFVGSSWKRDQSPVSVFQGPVSCSSSSVSGSARTSPMRIGGDSSIRFRDSGLLDGFVRNSLGSCLDYNSPSFELHGGDIADELTFNLEDSFVGVNFEQYARELLVGAQLKHKIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCVETAVLLALIGANSTVVAAGLLHDSLDDSFLTYDYIFGLFGAGVADLVEGVSKLSHLSKLARENNTACKSVEADRLHTMFLAMVDARAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGISSWKEQLENLCFKHLNPEEHQEISSKLVESCDDAMITSAIEKLEQALKDEGISYHVLSGRHKSLYSIYCKMLKKKLSMNDIHDIYGMRLIVDKEEDCYKALTIVHRLWSEVPGKFKDYICHPKFNGYKSLHTVVMGEGKVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSYVVQMVEWARWVVTWHCETMKKDCSAVGCADSVKPPCKFPSHADDCPHSYKPHCGQDGPVFIILIENDKMSVQEFPANSMVMDLLERVGRGSSKWTPYRFPLKEELRPRLNYEPVNDPKCKLNMGDVVELTPALPDKSLTEYREEIQRMYNRELTVPASTGMVGSRS 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00306 717 ProSiteProfiles HD domain profile. 241 345 IPR006674 -
Accr6g00306 717 Pfam HD domain 226 376 - -
Accr6g00306 717 FunFam GTP pyrophosphokinase RelA 202 392 - -
Accr6g00306 717 SUPERFAMILY Nucleotidyltransferase 382 571 IPR043519 -
Accr6g00306 717 ProSiteProfiles S4 RNA-binding domain profile. 659 695 - -
Accr6g00306 717 SUPERFAMILY HD-domain/PDEase-like 204 392 - -
Accr6g00306 717 PANTHER GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE 113 687 - -
Accr6g00306 717 Gene3D Beta Polymerase, domain 2 393 525 IPR043519 -
Accr6g00306 717 Gene3D Hypothetical protein af1432 202 392 - -
Accr6g00306 717 SMART hd_13 237 354 IPR003607 -
Accr6g00306 717 Pfam Region found in RelA / SpoT proteins 435 544 IPR007685 GO:0015969
Accr6g00306 717 CDD NT_Rel-Spo_like 415 533 IPR007685 GO:0015969
Accr6g00306 717 FunFam GTP pyrophosphokinase RelA 393 525 - -
Accr6g00306 717 SMART RelA_SpoT_2 435 545 IPR007685 GO:0015969
Accr6g00306 717 CDD HDc 239 367 IPR003607 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00306 Accr-Chr6 4798429 4802102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00306 234 544 EF-hand Containing Proteins AT3G17470 29.129 8.76e-37 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00306 K00951 - qsa:O6P43_018406 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00306 6 4798429 4802102 Accr6g00306 6 4798429 4802102 ECH