Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00291 ATGTCCTGGGCAGGCCCTGAGGATATCTTCCTTTCCACTTCACTCGCTAGTTATCTTGACAAGAAACTTCTTGTATTGCTGAGAGATGGTAGAAAGCTAATGGGAACACTTCGCTCTTTTGATCAATTTGCTAATGCTGTTCTTGAGGGTGCGTGTGAGAGGGTTATTGTCGGTGATCTGTATTGCGATATCCCTTTGGGTCTCTATGTAATCCGTGGGGAGAATGTTGTTTTGATTGGTGAGCTGGACTTGGAAAAAGAGGAACTTCCCCCGCATATGACACGTGTTTCAGCTGCAGAAATTAGAATGGCACAGAAAGCAGAAAGGGAGGCTACAGATCTGAAGGGAACAATGAGGAAGAGGATGGAGTTCCTGGACATGGACTAG 387 0.4574 MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDLYCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIRMAQKAEREATDLKGTMRKRMEFLDMD 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00291 128 SMART Sm3 13 81 IPR001163 -
Accr6g00291 128 Pfam LSM domain 14 80 IPR001163 -
Accr6g00291 128 ProSiteProfiles Sm domain profile. 10 85 IPR047575 GO:0003723
Accr6g00291 128 SUPERFAMILY Sm-like ribonucleoproteins 14 85 IPR010920 -
Accr6g00291 128 PANTHER LSM1 8 122 IPR044642 -
Accr6g00291 128 FunFam U6 snRNA-associated Sm-like protein LSm1 12 125 - -
Accr6g00291 128 CDD LSm1 12 82 IPR034104 GO:0000956
Accr6g00291 128 Gene3D - 12 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00291 Accr-Chr6 4389118 4391416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00291 K12620 - ming:122084145 245.358