Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00237 ATGGCGGAGAAATCATGTGTCAAGCGCCTTCAGAAGGAATTTAGAGCTCTTTGTAAAGAGCCCGTGTCCCATATTGTTGCTCGTCCATCTCCTAATGATATACTTGAGTGGCATTATGTGTTGGAAGGAAGTGAAGGAACGCCTTTTGCAGGTGGATATTATTATGGAAAAATCAAGTTTCCTCCTGAATATCCATATAAACCTCCTGGAATCAGCATGACTACTCCTAATGGACGCTTCATAACACAGAAAAAGATCTGCTTGTCCATGAGTGACTTTCATCCAGAAAGTTGGAATCCTATGTGGTCCGTATCAAGCATACTTACGGGTCTTCTATCCTTCATGGTGGACACCAGTCCAACGACTGGCAGTGTGAGCACTACTACCGAAGAGAAGCGACGTTTAGCAAAATCTTCCCTTGCTTTCAATTGCAAGAATGCAACATTCAGGAAAATGTTCCCTGAATATGTTGATAAGTACAACCAGCGGCTTTCCGAGCAAGCTGCCTCTGAACAAACGGCATCTGAGGTGGCATCTCGTGACAAGAGTTCAAGGCCCATGTTGAGAAAAGTTACAGAGTCTACAGGAGAAGACATGAAAGTATCAGCAGGGGAATTGAAAGAGGTGATGAAAAACAGAAAGCAATCTTTACCCACATGGATGATGTTGTTGCTCTTTTCGATTTTTGGGCTTATAATGGCATTGCCTCTGCTTCAGCTTTGA 723 0.4329 MAEKSCVKRLQKEFRALCKEPVSHIVARPSPNDILEWHYVLEGSEGTPFAGGYYYGKIKFPPEYPYKPPGISMTTPNGRFITQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMVDTSPTTGSVSTTTEEKRRLAKSSLAFNCKNATFRKMFPEYVDKYNQRLSEQAASEQTASEVASRDKSSRPMLRKVTESTGEDMKVSAGELKEVMKNRKQSLPTWMMLLLFSIFGLIMALPLLQL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00237 240 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
Accr6g00237 240 MobiDBLite consensus disorder prediction 182 196 - -
Accr6g00237 240 MobiDBLite consensus disorder prediction 167 196 - -
Accr6g00237 240 Gene3D Ubiquitin Conjugating Enzyme 1 178 IPR016135 -
Accr6g00237 240 FunFam Ubiquitin-conjugating enzyme E2 34 1 177 - -
Accr6g00237 240 SUPERFAMILY UBC-like 5 156 IPR016135 -
Accr6g00237 240 CDD UBCc 7 157 IPR000608 -
Accr6g00237 240 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 6 164 - -
Accr6g00237 240 SMART ubc_7 8 162 - -
Accr6g00237 240 Pfam Ubiquitin-conjugating enzyme 9 125 IPR000608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00237 Accr-Chr6 3653586 3655530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00237 1 240 Miscellaneous Gene Families AT1G17280 73.859 1.59e-134 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00237 K04554 - gmx:100778181 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00237 6 3653586 3655530 Accr6g00237 6 3653586 3655530 ECH