Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00148 ATGACGCGGCTATTTCGATCTAAATCCTGTGAATTTGTTGGTCGCACTGAGTTCAGCCCATCTCCTCCGAGTCCGTTTCTCTGCAATTTTAAAAAGCAGGAGGAAGAGAAAGAAGAGTTGGTGGGAGATGATGATGATGATTTGAGAAAACCCATCTCAAAAGATGGTGTGACAGCTAATAATCAATCTCATTTTGCGATACTGAATGTTGTGGTGGAGGTGTTGAAAAAGTCGCTGGTGACATGTAGTGTCGAGAAGGATGATGATTCTTCCATGGATATCGGCTGGCCAACGGAGGTTCGTCATGTCTCCCACGTCACCTTCGATAGGCTTCATGGTTTTCTGGGTTTGCCCTCCGAGCTCGAACCAGAGGTCCCCAGAAGCGCCAGTGCCAAGGTATTTGGGGTTTCTGCAGAGTCAGTGGAATGTTCTTATGACGACAAGGGGAACTATGTCCCAACAATTCTGCTGTCAATGCAAAAGCAACTGTATTCAGAGGGAGGCCTTAAAGTAGAAGGAATATTCCGAATTAATGCTGAGAGCAGCCAAGAAGAGCATGTGCGTGATCAGCTGAACAAAGGTGTAGTCCCACATGGAATCGATGTTCATTGTTTGTCTGGTTTGATAAAGGCTTGGTTTAGAGAACTTCCATCAAGAGTGCTTGCTTCTCTCACCCCAGAAGAGGTGGTAAATTGTAACACAGAAGAGGATTGTGCTAATTTAGTGAAGTTACTTCCCCCAACAGAGGCAGCACTGCTTCGCTGGGTCATCAATTTGATGGCTGACGTTGTCGAGCATCAAGAATTCAACAAGATGAACCCGCACAATATTGCTATGGTTTTTGCGCCCAACATGACTCAGATAGTGGATCCTTTAACTGCGTTGACTCAAGCAGTACAAGTTGTGAATTTCCTCAAGACATTGATTCTGGAGGTCGTGAGAGAAAGAGGCAAATCAAATCCCGAGGCGAGGCAGTTTTCCTCATGCTCAGCTTCTCCCTATTTTGAAGCTGATCTGCTTCCTGTAAACTTTAGCAGTGAGGAAGCTTGTGAGAAGAGTGAAGATTATTCTGCCAGAAAGCCAAGTTTTAAGGATAACTTCATAAGGACTTCAACTTTGGGAAGAATAGAGTGGAGAATGAAGGAGAAACTGTGGGGTTGCGAGGGAAGTGAATGTGTTGTGGATGAAAGTACGCCTTCTAGACGCGAGATAATTGGTAGTTTAGAGTACAGATATAGGAGATGTGAGGGGGATCATTATTGGCTAAGATTGAGGAAGAAAATACATAAGCTATGGAGGCACCCTGTATTCTTGTGGAACAAAGGCAGGTAA 1332 0.4467 MTRLFRSKSCEFVGRTEFSPSPPSPFLCNFKKQEEEKEELVGDDDDDLRKPISKDGVTANNQSHFAILNVVVEVLKKSLVTCSVEKDDDSSMDIGWPTEVRHVSHVTFDRLHGFLGLPSELEPEVPRSASAKVFGVSAESVECSYDDKGNYVPTILLSMQKQLYSEGGLKVEGIFRINAESSQEEHVRDQLNKGVVPHGIDVHCLSGLIKAWFRELPSRVLASLTPEEVVNCNTEEDCANLVKLLPPTEAALLRWVINLMADVVEHQEFNKMNPHNIAMVFAPNMTQIVDPLTALTQAVQVVNFLKTLILEVVRERGKSNPEARQFSSCSASPYFEADLLPVNFSSEEACEKSEDYSARKPSFKDNFIRTSTLGRIEWRMKEKLWGCEGSECVVDESTPSRREIIGSLEYRYRRCEGDHYWLRLRKKIHKLWRHPVFLWNKGR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00148 443 Pfam P21-Rho-binding domain 93 125 IPR000095 -
Accr6g00148 443 SUPERFAMILY GTPase activation domain, GAP 131 310 IPR008936 -
Accr6g00148 443 SMART PBD_5 94 128 IPR000095 -
Accr6g00148 443 PANTHER MKIAA1688 PROTEIN 1 350 IPR044785 GO:0005096
Accr6g00148 443 CDD RhoGAP 153 309 - -
Accr6g00148 443 Pfam RhoGAP domain 153 287 IPR000198 GO:0007165
Accr6g00148 443 CDD CRIB 92 132 - -
Accr6g00148 443 Gene3D Rho GTPase activation protein 124 316 IPR008936 -
Accr6g00148 443 ProSiteProfiles Rho GTPase-activating proteins domain profile. 136 313 IPR000198 GO:0007165
Accr6g00148 443 SMART RhoGAP_3 150 313 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00148 Accr-Chr6 2524938 2526894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00148 - - gmx:100789327 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00148 6 2524938 2526894 Accr6g00148 6 2524938 2526894 ECH