Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00147 ATGGGAAGTGGACCCAAGAGTCTGAGGAGCTTTCATATCCATGGAAAGAAGCACGAGTTCAGAGACGTTCCAAAAGGGTGCTTGGCCATCAAGGTGGGTCAAGGAGAAGACGACTTGCAGAGATTCGTGGTGCCTCTGATTTACTTCAGCCATCCTCTGTTTTTGCAGCTGTTGAAGGAGGCCGAAGAAGAATTCGGCTTCGATCACAAAGGAACCATCACGATTCCATGCCACATCGAGGAGTTCCGGTCCGTTCAAGACATGATCGATCGGGAATGGTCTCGTCACCACCACGCTCACGGTGGCTGCTTCGGTTTTTGA 321 0.5109 MGSGPKSLRSFHIHGKKHEFRDVPKGCLAIKVGQGEDDLQRFVVPLIYFSHPLFLQLLKEAEEEFGFDHKGTITIPCHIEEFRSVQDMIDREWSRHHHAHGGCFGF 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00147 106 Pfam Auxin responsive protein 18 89 IPR003676 GO:0009733
Accr6g00147 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 16 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00147 Accr-Chr6 2508924 2509244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr6g00147 22 83 Calmodulin-binding Proteins AT5G20810 56.452 8.56e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00147 K14488 - pvy:116108881 167.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00147 6 2508924 2509244 Accr6g00147 6 2508924 2509244 ECH