Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00140 ATGATTCTCCACAATCCATTTTTCCTATTCATTCTTATCATGTTTTTGTTGTATATAACTCGCGTGGTTCTGTTTAAAACTGGGTTGATGTACACCATCAAGAAATGTTGGAGAATCATTGAAGATTGTTTTTATGTTTACCAGAGCTTCAGAGTCCCTGAACTTTATGAAGACATGTTGGAGAATCCGCTTTACAGGAAGGTCTCTCTTTATCTGCATTCTCTGCCTTCCCTTGAAGATTCCGATTTCACCAACTTGATCACGGGGAAGAAGAACAACGATATTGTTCTCTGCCTTGACCCAAAACAGACCGTTGAGGACGATTTTCTCGGAGCTAGAGTTTTTTGGCTCAATGAGGGAGACGATAAGACCGATTCAAACCGTAACAGAGCGTTCATCCTGAAGATCAGGAAAGCTGATAAGCGCCGAATTCTCCGTCCTTATCTTAAGCACATCCACACCATCGTTGACGAAGGAAAACGTGATTTGAGGCTATTCATGATCACCGACCCTATTGGCGGTGGGAAAGGACGGTGGAGATCCGTCCCGTTCACGCATCCCTCGACCTTCGACTCTATCGCCATGGAAAGCGACCTCAAAAACAAGGTGAAATCCGATCTCGAATCGTTCCTCAAGGCGAAGCAGTACTACAACAGACACGGCCGCGTATGGAAACGGAGCTTCCTCCTGTACGGCCCTTCCGGCACCGGGAAATCGAGTTTTGTCGCCGCGATGGCCAATTTTCTCTGCTACGACGTGTACGATATGGATCTCTCGAAAGTCCCGAGCGATTCGGACCTGAAATCAATGCTGCTCCAGACGACAGCGAAATCAATCATCGTCGTCGAAGACCTGGATCGGTTCCTAATCGAGAAATCTAAGGCTGTGAGCTTATCGGGGATTCTGAACTTCATGGACGGGATTCTGACCTCGTGCTGTGCCGAGGAGATGATCATGGTGTTCACGATGAACAGCAAGGAGCACGTGGATCCGGATTTGCTCCGACCGGGTCGGGTCGACGTCCACATCCAGTTCTACCTGTGCGATTTCCCGGCGTTCAAGACGCTAGCAAGTAGCTATTTGGGGGTGAAGGACCACAAGCTGTTCCCTCAGGTGGAGGAGATGTTTCAGAAGGGAGCGAGTCTGAGCTCGGCGGAAATCGGCGAGTTGATGATAACGAATCGCAACTCACCGAGTCGGGCGATAAAATCGGTCATAAGCGCCTTGCAAACTGACGGCGATGGCAGGGGGCGAGGCGGGAAGATTGTACGGCAGTTAGGGGGCCGCGCTGTGGACGTAACGGAGGAAACAGACGGAGTTCTATGCGCTGATGGCTTCCATTCGGTTAAGGATTTGCGAAGAGTGTACGGTTTCTTTAGATCAAAGAACCACCAGAAATCTCAACCGTTGTTGCTAAGGCGATGA 1425 0.4947 MILHNPFFLFILIMFLLYITRVVLFKTGLMYTIKKCWRIIEDCFYVYQSFRVPELYEDMLENPLYRKVSLYLHSLPSLEDSDFTNLITGKKNNDIVLCLDPKQTVEDDFLGARVFWLNEGDDKTDSNRNRAFILKIRKADKRRILRPYLKHIHTIVDEGKRDLRLFMITDPIGGGKGRWRSVPFTHPSTFDSIAMESDLKNKVKSDLESFLKAKQYYNRHGRVWKRSFLLYGPSGTGKSSFVAAMANFLCYDVYDMDLSKVPSDSDLKSMLLQTTAKSIIVVEDLDRFLIEKSKAVSLSGILNFMDGILTSCCAEEMIMVFTMNSKEHVDPDLLRPGRVDVHIQFYLCDFPAFKTLASSYLGVKDHKLFPQVEEMFQKGASLSSAEIGELMITNRNSPSRAIKSVISALQTDGDGRGRGGKIVRQLGGRAVDVTEETDGVLCADGFHSVKDLRRVYGFFRSKNHQKSQPLLLRR 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00140 474 Gene3D - 180 347 IPR027417 -
Accr6g00140 474 Pfam Domain associated at C-terminal with AAA 31 116 IPR025753 -
Accr6g00140 474 PANTHER BCS1 AAA-TYPE ATPASE 40 410 - -
Accr6g00140 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 407 IPR027417 -
Accr6g00140 474 SMART AAA_5 224 349 IPR003593 GO:0016887
Accr6g00140 474 Pfam ATPase family associated with various cellular activities (AAA) 229 345 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00140 Accr-Chr6 2293201 2294625 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00140 - K08900 qsa:O6P43_018558 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00140 6 2293201 2294625 Accr6g00140 6 2293201 2294625 ECH