Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr6g00132 ATGCCGGGTCTAGTTGCCATGAAAACCCCACCTCAAACGATGCCGTTCGGGGTCTCCGCCACCGGATATTCCAATGGCACCGAACAAAGACCTTCTTCGCCCATCGTGAAGCGAAACTTAAAGAAGTCACAGGAAAACCTGATCGCCGACAATTCCTCCGTCGACAACCCGGACTTGGGTCCATTTCTTCTGAAGCTAGCCCGAGATGCTATAGCTTCGGGCGAGAACCCGAACAAGGCGTTGGACCTTGCGATCCGGGCGTCCAAATCATTCGAGCGATGTTCGGGGCCAGGCCTGGAGCTTGCAATGTGTTTGCACGTTGTGGCGGCGATCTTCAGTAGTTTGGGGCGGTTCGGGGAGGCGATTCACGAGTTGGAGCGGTCCATTGAGTTTCCGGATCCCGAAAAAGGGTCGGATCATGCCATGGCGAAGTTTTCCGGGTACATGCAATTAGGGGATACGTATTCGATGATTGGGCAGCTGCAACGGTCTATCAAGTGTTACAGTTCGGGTTTGCAGATACAAATGGAGGCTTTGGGACAGTCCGACCCGAGAGTTGCAGAGACGTGCAGGTACTTAGCTGAAGCCCATGTTCAAGCTATGCAATTTGATGAGGCAGAGAACTTCTGCAAGAAGGCTCTTGAAATTCACAGGGAGCATAGCTCCCCAGCGTCCCTTCCTGAAGCAGCTGATCGGCGCCTTATGGCTCTCATATGTGATGCAAAGGGAGATTATGAATCAGCACTTGAGCACCTTGTCCTGGCCAGCGTATCAATGATTGCCAATGGACAAGACAGTGAAGTTGCAGCTATTGATATAAGCATCGGCGATATTTACTTGTCACTCTGTCGTTTTGATGAGGCTGTCTTTGCCTACCAGAAAGCTCTGACCGTGTTCAAATCCACCAGAAGCGAGAACCGTGGTTCTGTGGCATTAGTATACATTCGCCTCGCTGACCTTTACTACAAGACAGGAAAACTAAGAGAGTCAAAGTCCTACTGTGAAAATGCCTTAAGAATATACAGCAAACCTGTTCATGGAACCTCCCCTGAAGAGGTTGCCACTGGGTTAACCGAAATCTCTGCCATCTATGATGGTCTCAATGAGCCTGAAGAGGCACTGAAGCTCTTGCAGAAGGCAATGAAGTTATTGGAGGATAACCCCGGACAGTATAGGACGATAGCAGGAATTGAAGCACAAATGGCCGTAATGTTCTACACGGTAGGGAGGTTCAAGGAGGCTCGGGACTCTTTTCAAAGTGCTATCACTAAGCTGAGGGCTAGCGGGGAGAGGAACTCTGCCTTTTTTGGCGTCTTGTTGAACCAAATGGGGCTGGCTTGTGTGCAACTGTACAAAATAGAAGAAGCAACCAAACTTTTTGAAGAGGCAAGAGAGATACTAGAGAAGGAGTGTGGGGCATATCATTTGGACACTCTAGGAGTGTATAGCAACCTTGCAGCAACTTACGATGCCATAGGAAGGGTTGATGATGCAATTGAGATACTGGAGCAGATACTGAAGATGAGAGAAGAAAAGCTTGGAACGGCAAATCCAGACGTTGATGATGAAAAGAAAAGACTATATGAGCTTTTGAAAGAAGCAGGAAGAGTTCGGAATAAAAAGGGAAAATCCCTTGAAAATCTTATAGATTCCAATTTTCTAAAGATGAAGAAGAAAGGAAGGAAGAGAAGAACTGCATTTGGTTTGAGAACTTAG 1716 0.479 MPGLVAMKTPPQTMPFGVSATGYSNGTEQRPSSPIVKRNLKKSQENLIADNSSVDNPDLGPFLLKLARDAIASGENPNKALDLAIRASKSFERCSGPGLELAMCLHVVAAIFSSLGRFGEAIHELERSIEFPDPEKGSDHAMAKFSGYMQLGDTYSMIGQLQRSIKCYSSGLQIQMEALGQSDPRVAETCRYLAEAHVQAMQFDEAENFCKKALEIHREHSSPASLPEAADRRLMALICDAKGDYESALEHLVLASVSMIANGQDSEVAAIDISIGDIYLSLCRFDEAVFAYQKALTVFKSTRSENRGSVALVYIRLADLYYKTGKLRESKSYCENALRIYSKPVHGTSPEEVATGLTEISAIYDGLNEPEEALKLLQKAMKLLEDNPGQYRTIAGIEAQMAVMFYTVGRFKEARDSFQSAITKLRASGERNSAFFGVLLNQMGLACVQLYKIEEATKLFEEAREILEKECGAYHLDTLGVYSNLAATYDAIGRVDDAIEILEQILKMREEKLGTANPDVDDEKKRLYELLKEAGRVRNKKGKSLENLIDSNFLKMKKKGRKRRTAFGLRT 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr6g00132 571 ProSiteProfiles TPR repeat profile. 269 302 IPR019734 GO:0005515
Accr6g00132 571 Gene3D Tetratricopeptide repeat domain 431 547 IPR011990 GO:0005515
Accr6g00132 571 Coils Coil 367 387 - -
Accr6g00132 571 Pfam Tetratricopeptide repeat 268 342 - -
Accr6g00132 571 Pfam Tetratricopeptide repeat 439 511 - -
Accr6g00132 571 MobiDBLite consensus disorder prediction 1 34 - -
Accr6g00132 571 Gene3D Tetratricopeptide repeat domain 37 257 IPR011990 GO:0005515
Accr6g00132 571 SUPERFAMILY TPR-like 102 515 IPR011990 GO:0005515
Accr6g00132 571 SMART tpr_5 311 344 IPR019734 GO:0005515
Accr6g00132 571 SMART tpr_5 395 428 IPR019734 GO:0005515
Accr6g00132 571 SMART tpr_5 102 135 IPR019734 GO:0005515
Accr6g00132 571 SMART tpr_5 354 387 IPR019734 GO:0005515
Accr6g00132 571 SMART tpr_5 479 512 IPR019734 GO:0005515
Accr6g00132 571 SMART tpr_5 187 220 IPR019734 GO:0005515
Accr6g00132 571 SMART tpr_5 269 302 IPR019734 GO:0005515
Accr6g00132 571 SMART tpr_5 437 470 IPR019734 GO:0005515
Accr6g00132 571 SMART tpr_5 145 178 IPR019734 GO:0005515
Accr6g00132 571 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 30 552 - -
Accr6g00132 571 Pfam MalT-like TPR region 148 253 IPR041617 -
Accr6g00132 571 Gene3D Tetratricopeptide repeat domain 258 430 IPR011990 GO:0005515
Accr6g00132 571 MobiDBLite consensus disorder prediction 14 34 - -
Accr6g00132 571 ProSiteProfiles TPR repeat profile. 354 387 IPR019734 GO:0005515
Accr6g00132 571 ProSiteProfiles TPR repeat profile. 479 512 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr6g00132 Accr-Chr6 2133338 2136875 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr6g00132 - - gmx:100794697 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr6g00132 6 2133338 2136875 Accr6g00132 6 2133338 2136875 ECH