Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02798 ATGGCTCCTGATATCAACACCGTCGTGGCCAACGCCACCACTACCCAGGCAAAGGCCACCGGGGACCGTGCCTTCGTGACTTTCCTCGCTGGCAATGGAGACTACGTGAAGGGAGTGGTGGGGCTGGCTAAGGGTCTGAGAAAGGTGAAGAGCAAGTACCCTTTGGTGGTTGCTATTCTGCCAGATGTTCCCCAGGAGCACCGTCAGATTCTAATCTCTCAAGGCTGCATCGTCCGAGAGATCGAGCCGGTCCACCCGCCTGAGAACCAAACCCAGTTCGCCATGGCTTATTATGTCATCAATTACTCCAAGCTTCGCATCTGGGAGTTCGTGGAGTACAATAAGATGATCTATCTTGATGGAGACATCCAGGTGTTTGACAACATAGACCATCTTTTTGATCTGCCAAACGGCTACTTCTACGCCGTGATGGACTGTTTCTGCGAGAAAACTTGGAGCCATTCCCCACAGTACAAGATCGGCTACTGCCAGCAGTGCCCTGATAAGGTTCGGTGGCCAGCTGAGTTTGGACCCAAGCCTCCACTGTACTTCAACGCTGGCATGTTTGTTTACGAGCCTAATCTGTCCACCTACCGTGACCTCCTCAAAATCCTTCAAGTCACTGAGCCTACTTCCTTCGCTGAGCAGGACTTCCTGAACATGTACTTCAAGGACAAATATAAGCCCATACCCAACGTTTACAACCTTGTGCTGGCCATGCTATGGCGTCACCCTGAGAACGTTGAGCTTCACAAAGTGAAAGTAGTTCACTATTGTGCTGCTGGGTCAAAGCCATGGAGATACACAGGGAAAGAGGAAAACATGGACAGGGAAGACATAAAGATGCTGGTGAAGAAGTGGCGGGACATATACGAGGATGAGACGCTGGACTATGTGAACCCAGTGAATGTGGGGCGTATTCAGGAGGCACTATCCGAGGCTGGCCGGGTTGCATTCGTGCCCGCCCCATCTGCCGCTTAG 981 0.5189 MAPDINTVVANATTTQAKATGDRAFVTFLAGNGDYVKGVVGLAKGLRKVKSKYPLVVAILPDVPQEHRQILISQGCIVREIEPVHPPENQTQFAMAYYVINYSKLRIWEFVEYNKMIYLDGDIQVFDNIDHLFDLPNGYFYAVMDCFCEKTWSHSPQYKIGYCQQCPDKVRWPAEFGPKPPLYFNAGMFVYEPNLSTYRDLLKILQVTEPTSFAEQDFLNMYFKDKYKPIPNVYNLVLAMLWRHPENVELHKVKVVHYCAAGSKPWRYTGKEENMDREDIKMLVKKWRDIYEDETLDYVNPVNVGRIQEALSEAGRVAFVPAPSAA 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02798 326 Pfam Glycosyl transferase family 8 27 269 IPR002495 GO:0016757
Accr5g02798 326 FunFam Hexosyltransferase 21 299 - -
Accr5g02798 326 PANTHER GLYCOGENIN SUBFAMILY MEMBER 16 293 - -
Accr5g02798 326 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 297 IPR029044 -
Accr5g02798 326 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 21 300 IPR029044 -
Accr5g02798 326 CDD GT8_Glycogenin 23 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02798 Accr-Chr5 53781677 53782981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02798 1 326 Glycosyltransferase AT1G56600 77.515 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02798 K18819 - gmx:548050 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g03428 2 69904668 69906037 Accr5g02798 5 53781677 53782981 CCT
Accr5g02798 5 53781677 53782981 Accr5g02798 5 53781677 53782981 ECH
Accr2g03316 2 68780071 68781522 Accr5g02798 5 53781677 53782981 ECH