Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02684 ATGACAATGGCCGTCGCTACTACCTCTCTCAATGCTTCAGATAAGAAGCACTGGTGGCTGACCAACCGAAAGGTTGTTGAGAAGTACATCAAAGACGCTCGCTGCCTCATTGCGACCCAAGAACAGAGCGAGATCGCATCGGCTCTGAACCTTGTAGACGCGGCACTGGCCATATCTCCACGCCTAGACCAGGCGCTGGAGCTCAGAGCCAGGTCTCTTCTTTATCTCCGGCGTTTTAAGGAGGTCGCCGATATGCTTCAGGACTACATTCCCAGCCTCAAGATGGCGGTCGAGGACTCGGGCTCTTGTTCTTCGGATAGTTCGTCTCAGCAGCTCTCAAGGGAGGGAGTGAAGCTGCTATCTTCTTCGGAGTCTTCGCCGGATCAGAGTTTCAAGTGCTTCTCCGTCTCCGACTTGAAGAAGAAAGTGATGGCAGGACTGTGTAAAAGTGGCGAGAAGGGAGGGCAATGGAGATACTTGGTGCTGGGTCAAGCATGTTGCCATCTCGGTCTGATGGAGGATGCGATGGTTCTTCTCCAAACCGGTAAACGACTTGCCAGCGCCGCCTTCCGCCGTGAAAGCGTCTGCTGGTCCGACGACAGCTTCTCTTTAACAAACATTCCCTTCTCAGGTGACGCAGCCAACCCCTCTACCACTACTCCACCTCGGACACCTCTGACCGAATTCGAGAGCGTCACACAACTCCTCAGTCACATCAAGCTCCTCGTCCGCCGTCGCACTGCAGCGCTTGCCGCCCTCGACGCCGGTCTCTATTCTGAGGCCATCCGCCACTTCTCCAAAATCGTCGATGGCCGCCGTGGTGCTCCGCAAGCCTTTCTTGCCGAATGCTATATGCACAGAGCCTCTGCCTACCGTTCCGCAGGCCGAATAGCGGAGTCCATTGCGGATTGTAATCGCACTCTGGCTTTGGACCCCACTTGCATTCAAGCTCTTAATACCAGAGCTGCCCTTCTAGAATCCGTTCGGTGCTTGCCTGATTGCCTACATGATCTTGAACACTTGAAGCTTTTGTATAATACAATCTTACGGGACCGCAAGCTGCCAGGTCCAGCTTGGAAGCGTCATAATGTAAGGTACAGAGAGATTCCTGGGAAACTTTGTGCTCTGACGACGAAAATTCAAGAGCTGAAGCAAAGGGTGGCTTCAGGGGAAACTGGTAATGTGGATTACTACGCTTTGATTGGACTGCGACGTGGTTGCTCTCGATCGGAATTGGAGAGGGCTCATTTATTGCTCTGTTTACGGCACAAACCGGATAAGGCTACCAGCTTCATTGATCGCTGTGAGCTTGCGGATGAACGTGATCTTGAAAACGTGAAGGAGAGGTCAAAAATGTCAGCGTTGTTATTGTACAGATTGATTCAGAAGGGTTACACAAGTGTGATGGCTTCGATCATGGACGAAGAAGCGGCCGAGAAGCAGAGGAAGAAGGCTGCGGCTGCTTTGCAAGTTGCACAAGCAGCAGCAATTCAGGTTCCGGAAAAAAGTGGGTGCAGAGCGGACTATGAGGGAAAGAAATCTGACAAAACTGTATCTTCATCGACGGTAAACCCTTCTGTATTCCAGGGGGTGTTTTGCCGTGATCTTTCGGTCGTCGGGAGCTTGCTTTCTCAAGTGGGATTCAACCGTTCAATTCCAATGAAATATGAGGCATTGAGCTGCTGA 1686 0.5184 MTMAVATTSLNASDKKHWWLTNRKVVEKYIKDARCLIATQEQSEIASALNLVDAALAISPRLDQALELRARSLLYLRRFKEVADMLQDYIPSLKMAVEDSGSCSSDSSSQQLSREGVKLLSSSESSPDQSFKCFSVSDLKKKVMAGLCKSGEKGGQWRYLVLGQACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLTNIPFSGDAANPSTTTPPRTPLTEFESVTQLLSHIKLLVRRRTAALAALDAGLYSEAIRHFSKIVDGRRGAPQAFLAECYMHRASAYRSAGRIAESIADCNRTLALDPTCIQALNTRAALLESVRCLPDCLHDLEHLKLLYNTILRDRKLPGPAWKRHNVRYREIPGKLCALTTKIQELKQRVASGETGNVDYYALIGLRRGCSRSELERAHLLLCLRHKPDKATSFIDRCELADERDLENVKERSKMSALLLYRLIQKGYTSVMASIMDEEAAEKQRKKAAAALQVAQAAAIQVPEKSGCRADYEGKKSDKTVSSSTVNPSVFQGVFCRDLSVVGSLLSQVGFNRSIPMKYEALSC 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02684 561 Coils Coil 475 495 - -
Accr5g02684 561 Gene3D DnaJ domain 381 524 IPR036869 -
Accr5g02684 561 Gene3D Tetratricopeptide repeat domain 224 354 IPR011990 GO:0005515
Accr5g02684 561 SUPERFAMILY TPR-like 248 342 IPR011990 GO:0005515
Accr5g02684 561 SMART tpr_5 281 314 IPR019734 GO:0005515
Accr5g02684 561 CDD DnaJ 396 430 IPR001623 -
Accr5g02684 561 SUPERFAMILY Chaperone J-domain 392 430 IPR036869 -
Accr5g02684 561 PANTHER OS01G0273500 PROTEIN 10 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02684 Accr-Chr5 52870181 52872487 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02684 - - gmx:100808420 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g03275 2 68350944 68353301 Accr5g02684 5 52870181 52872487 CCT
Accr5g02684 5 52870181 52872487 Accr5g02684 5 52870181 52872487 ECH