Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02580 ATGACCCAACAAGACAGAGACCACACCAACTCTCTCGTCCCCTCCCTGTTGAGTGCTTTGAGAAAATCAATGGTGTCTTGTCGGATGCATCCACCCGACGATGTAATCTCGGCCGTCCCTCATGACTTCGAAACTGGATGGCCCACCGACGTTCGGCACATCACTCATGTCACTTTCGATCGCTTCAATGGCTTCCTGGGTCTGCCCGCCGACCTCCAGCTCGAGATTCCGGGTCGGGTCCCCAGCGCCAGTGCGAGTGTGTTTGGCGTCTCAGCGGAATCAATGCAGTGTTCTTATGATTCAAAAGGGAATAGTATCCCAACTATCCTGTTATTAATGCAGGAGCGTTTATACTCACATGGAGGCCTAGAGGCCGAAGGAATTTTTCGCATAAACCCAGAGAACAGTGAAGAGGAGAATGTGAGGGGGCAGTTGAACAGGGGGATTGTGCCGGACGACATTGATGTACATTGTTTGGCAGGTCTGATCAAGGCCTGGTTTCGAGAGCTGCCTTCTGGAATTCTAGATGGACTTTCTCCAGAGCAAGTTCTTCAGAGCAATACAGAAGAAGAATACGTTGAACTGGTAAAGCAATTAAAGCCCACTGAAGCTGCCTTGCTCAATTGGTCTGTTAATCTCATGGCTGACGTTGTTGAACACGAAGAACACAACAAAATGAATGCAAGAAATATTGCCATGGTTTTTGCTCCCAACATGACTCAGATGTCTGATCCACTTACTGCTTTGATGCACGCGGTCCAAGTGATGAACTTCCTCATGACTCTTATAATGAAGACACTCACGGAACGAGAAGAAGCGGCAGGTTCACCCACGTCGTTTCATTCATCTGAGGATGAGTATGAAAGTGAAGAAGAAATGGATACTAGTGATGGCGATGAAGAAGCGGAAGAGGAAGCCGAACCATCATTATGTGAGATAGAAGAATATGCTATGTCATATTCTGAAAGCGAAGCTAGGAAATCCATTTCCAGTTCTTCATGCGAAGAACAGTCCGTGAGATCCAGTGTTGAGTCAAGTACTAGTCCATCCATAAAATACCCAGGCAACAGTAACGTGGAGATAAATACTAAATTAACAGATTCATTGCCCGGTGACACCGTTTGA 1125 0.4684 MTQQDRDHTNSLVPSLLSALRKSMVSCRMHPPDDVISAVPHDFETGWPTDVRHITHVTFDRFNGFLGLPADLQLEIPGRVPSASASVFGVSAESMQCSYDSKGNSIPTILLLMQERLYSHGGLEAEGIFRINPENSEEENVRGQLNRGIVPDDIDVHCLAGLIKAWFRELPSGILDGLSPEQVLQSNTEEEYVELVKQLKPTEAALLNWSVNLMADVVEHEEHNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNFLMTLIMKTLTEREEAAGSPTSFHSSEDEYESEEEMDTSDGDEEAEEEAEPSLCEIEEYAMSYSESEARKSISSSSCEEQSVRSSVESSTSPSIKYPGNSNVEINTKLTDSLPGDTV 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02580 374 MobiDBLite consensus disorder prediction 323 374 - -
Accr5g02580 374 MobiDBLite consensus disorder prediction 271 374 - -
Accr5g02580 374 PANTHER MKIAA1688 PROTEIN 4 342 IPR044785 GO:0005096
Accr5g02580 374 MobiDBLite consensus disorder prediction 285 311 - -
Accr5g02580 374 Pfam RhoGAP domain 107 241 IPR000198 GO:0007165
Accr5g02580 374 SMART PBD_5 45 79 IPR000095 -
Accr5g02580 374 CDD RhoGAP 107 265 - -
Accr5g02580 374 FunFam Rho GTPase-activating protein 5 75 268 - -
Accr5g02580 374 SMART RhoGAP_3 104 267 IPR000198 GO:0007165
Accr5g02580 374 ProSiteProfiles Rho GTPase-activating proteins domain profile. 90 271 IPR000198 GO:0007165
Accr5g02580 374 Gene3D Rho GTPase activation protein 78 273 IPR008936 -
Accr5g02580 374 CDD CRIB 44 83 - -
Accr5g02580 374 SUPERFAMILY GTPase activation domain, GAP 85 264 IPR008936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02580 Accr-Chr5 52154798 52156740 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02580 - - tcc:18613455 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01825 2 52249148 52251443 Accr5g02580 5 52154798 52156740 CCT
Accr5g02580 5 52154798 52156740 Accr5g02580 5 52154798 52156740 ECH