Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02366 ATGGGGTCTCTGGCCACACTGCATCACTGTCGTCCACCTCTTCGCTTGCCACTCCATCATCTTCCTCCTTCACTGTCAACTCCCATATCTTCCGTCTCCTTCAGGTCTCTACCACCCCGTGTTTCGCCGTCGCAACTCTCGTCTTTCTCTTTCAGATCATCGTCCATTAGAGCCGCATCATCGCCGTCAGAATCCTTCACTGACTCTGCATTCCGTAGGCCTAGAACCACATTAGCGCAGTTGCTTCAAACCCTAAACTCCCTTCTCTCACCCGTCATCCGAACCACCTGCAGCGTCATAGCAGCGGCTGTGCTTTTCTACATGCGTCTTCACCACAAGGCCGCCATTGCAGCCCCCGTCGAGACGACCACGGTGGAGTCGATGGAAAATACTTCGAATGAAGAAAATCAAAGAGCTATTGATGAGAAATTGAGCAACAATCCCAATGATACCGACGCTCTTCGGTCGCTCATTGAGGTAAAGGTCAGGGCGCGCAAAATTGAGGAAGCAATCCAGGTTATAGACCGTTTAATTGAGCTCGAACCGGAAGAGTTTGAGTGGCCATTGCTGAAGGCTCACATGTATGTTTACAATGGTAACTACGAATTAGCTAAAGAGAAGTTCGAAGAAGTTCTAACCAAAGATCCCTATCGTGTCGAGGCCTATCATGGCCTAGTAATGGCAACTTCGGAATCGGATAAGTCTTTGGTGGATTTGTTGAGTAGGGTTGAAGAAGCAGTGGAATTGTGCAAAAAGCAAAAGCGCGAATCGGAAGTCAGGGATTTGAGGCTTTTGATTGCGCAGATCAAAGTCATGGAGGGAGACATTTCTGATGCTCTGAAGGCCTATCAGGAGCTTATAAGGGAAGAACCAAAGGATTTCAGGCCATACTTATGTCAGGGTATCATATATACTCTTCTAAGAAATAAAGATGAAGCTGAAAAACAATTTGACAAGTTCCGGAGGCTTATCCCTAAGAACCATCCTTATAGGGAGTATCTTGAGGATAATATGTTTGAAATGAATGTAATTTCACAGAAGGCAGAGAGAGAGGGAGCAGGTGCAAAGAACTGA 1074 0.4665 MGSLATLHHCRPPLRLPLHHLPPSLSTPISSVSFRSLPPRVSPSQLSSFSFRSSSIRAASSPSESFTDSAFRRPRTTLAQLLQTLNSLLSPVIRTTCSVIAAAVLFYMRLHHKAAIAAPVETTTVESMENTSNEENQRAIDEKLSNNPNDTDALRSLIEVKVRARKIEEAIQVIDRLIELEPEEFEWPLLKAHMYVYNGNYELAKEKFEEVLTKDPYRVEAYHGLVMATSESDKSLVDLLSRVEEAVELCKKQKRESEVRDLRLLIAQIKVMEGDISDALKAYQELIREEPKDFRPYLCQGIIYTLLRNKDEAEKQFDKFRRLIPKNHPYREYLEDNMFEMNVISQKAEREGAGAKN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02366 357 ProSiteProfiles TPR repeat profile. 260 293 IPR019734 GO:0005515
Accr5g02366 357 Pfam Tetratricopeptide repeat 270 325 - -
Accr5g02366 357 SUPERFAMILY TPR-like 142 334 IPR011990 GO:0005515
Accr5g02366 357 Coils Coil 236 256 - -
Accr5g02366 357 Coils Coil 269 289 - -
Accr5g02366 357 ProSiteProfiles TPR repeat profile. 151 184 IPR019734 GO:0005515
Accr5g02366 357 PANTHER CELL DIVISION CYCLE 16,23,27 166 338 - -
Accr5g02366 357 SMART tpr_5 185 218 IPR019734 GO:0005515
Accr5g02366 357 SMART tpr_5 294 327 IPR019734 GO:0005515
Accr5g02366 357 SMART tpr_5 151 184 IPR019734 GO:0005515
Accr5g02366 357 SMART tpr_5 260 293 IPR019734 GO:0005515
Accr5g02366 357 Gene3D Tetratricopeptide repeat domain 80 348 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02366 Accr-Chr5 49809919 49810992 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02366 - - qsa:O6P43_006759 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02135 2 56298064 56299137 Accr5g02366 5 49809919 49810992 CCT
Accr5g02366 5 49809919 49810992 Accr5g02366 5 49809919 49810992 ECH