Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02212 ATGGGGGCCTTGTTGTCCACCGTGGGAACGAACGGTGCGACCATCGTTCCGGGCCTAGGGGACATTCCCGAGGGCTGCGTGGCCTGCGTTCTTCTGTATTTGACTCCGCCAGAGATATGCAATTTGGCACGCCTGAATCGAGCTTTCCGCAGTGCTGCATCTGCTGATTCCGTGTGGGAAGCAAAGTTGCCCTCTAATTATCAATATCTGCTAGACTTAATGCCTCCCGATAGGTACCAGAATTTATCCAAGAAGTACATATTTGCGCTACTGTCTCGACCAGTGCCATTCGGTGATGGCAATAAGGAAGTTTGGCTGGACAGGATCACGGGAAAGGTTTGCGTGTCCATATCGGCGAAAGCAATGGCAATAACTGGAATTGACGATCGCAGATACTGGAATTGGATTCCCACAGAAGAATCTAGGGTCCACACTGTGGCTTATCTGCAACAAATATGGTGGTTTGAAGTGGATGGGGATGTGAAGTTTCCATTTCCTGCTGATGTTTATACTGTCTGCTTCAGGCTCCACATGGGAAGGTCTTCCAGAAGGCTTGGAAGGCGAGTATGCAATTACGAGCACACCCATGGTTGGGATATAAAACCAGTGAAATTTGAGTTGTCAACTTCAGATGGTCAGCAAGCATCGTCTGAGCACTGTTTGGATGAAACCGAGCGTGATGATGCATATGGCAATCATAAGAGGGGATGCTGGGTGAATTACAAGGTGGGCGAATTTGTTGTCAGTGGAACTGATCCTACCACTGAAGTTAGGTTCTCCATGAAACAGATCGATTGTACCCATTCCAAAGGTGGGCTTTGCGTAGATTCGGTATTTATTATTCCTAGTCATTTGAAGGAGCGCAAGAGAAAAGGCATTTTGAAGCAGCCGCGCATATAG 900 0.4789 MGALLSTVGTNGATIVPGLGDIPEGCVACVLLYLTPPEICNLARLNRAFRSAASADSVWEAKLPSNYQYLLDLMPPDRYQNLSKKYIFALLSRPVPFGDGNKEVWLDRITGKVCVSISAKAMAITGIDDRRYWNWIPTEESRVHTVAYLQQIWWFEVDGDVKFPFPADVYTVCFRLHMGRSSRRLGRRVCNYEHTHGWDIKPVKFELSTSDGQQASSEHCLDETERDDAYGNHKRGCWVNYKVGEFVVSGTDPTTEVRFSMKQIDCTHSKGGLCVDSVFIIPSHLKERKRKGILKQPRI 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02212 299 PANTHER F-BOX PROTEIN PP2-A15 14 290 - -
Accr5g02212 299 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Accr5g02212 299 Pfam Phloem protein 2 112 282 IPR025886 -
Accr5g02212 299 SUPERFAMILY F-box domain 17 87 IPR036047 GO:0005515
Accr5g02212 299 CDD F-box_AtSKIP3-like 19 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02212 Accr-Chr5 48391348 48394253 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02212 - - gmx:100775493 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02315 2 58354831 58358049 Accr5g02212 5 48391348 48394253 CCT
Accr5g02212 5 48391348 48394253 Accr5g02212 5 48391348 48394253 ECH