Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g02099 ATGTCGGTGAAAGAGTGCGAGCACCACCACGGTGGGTGTCGGGAGAAAAAATACCGAAAAATCGTTGCGGGGATAGTTATATTCCTGATCATAGTTGTGTTGACGATTCTCATCATCTGGGCGGCCTTGAGGCCTTCCAAGCCATCCTTCATCCTGCAGGACGTCACCGTGTACGCCTTCAATGCCAGCGTGCCCAACTTCCTCACCACAAGTTTCCAAGTCACCATCTTGGCCCGCAACACCAACGACAGGATCGGAGTCTACTACGACCATCTCGACAGCTACGTCGACTATCGCAACCAGCAAATCACCTACCGCACCGCCATCCCTCCCTCGTATCAGGGTCACAAGGAGCTCGACGTCTGGTCACCCTTCGTCTACGGCAACGACGTCCCCGTCGCTCCTTACAACTTCGAAGGACTGACTCAGGACCAGTCCAACGGCAACGTTCTGGTCACCATCAAGATCGATGGACGGGTCAGATGGAAGGTCGGGGCCTTCACTTCGGGCCGTTATCATATTTTCGTCAGGTGCCCCGCTTATATCAGCTTGGGATCCCAGAGCTCTGCATCCACCCTGGAAGGTAACGCCGTCAAGTATCAATTGGCCCAGCGATGCACCGTCAGCGTCTAA 633 0.5482 MSVKECEHHHGGCREKKYRKIVAGIVIFLIIVVLTILIIWAALRPSKPSFILQDVTVYAFNASVPNFLTTSFQVTILARNTNDRIGVYYDHLDSYVDYRNQQITYRTAIPPSYQGHKELDVWSPFVYGNDVPVAPYNFEGLTQDQSNGNVLVTIKIDGRVRWKVGAFTSGRYHIFVRCPAYISLGSQSSASTLEGNAVKYQLAQRCTVSV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g02099 210 PANTHER OS05G0367900 PROTEIN 18 191 IPR044839 GO:0098542
Accr5g02099 210 Pfam Late embryogenesis abundant protein 75 178 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g02099 Accr-Chr5 47333682 47334314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g02099 22 178 EF-hand Containing Proteins AT5G21130 19.108 1.93e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g02099 - - gmx:100500476 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02436 2 59758633 59759268 Accr5g02099 5 47333682 47334314 CCT
Accr5g02099 5 47333682 47334314 Accr5g02099 5 47333682 47334314 ECH