Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01942 ATGTCTGGCTCTACAAAAGTTTTGGATCCTGCATTCCAGGCAGTGGGTCAGAAAGTAGGGACTGAAATATGGAGGATTGAGAATTTTCAGCCAGTTCCGTTGCCTAAATCTGATTATGGAAAGTTCTACGTGGGAGATTCGTACATTATTTTGCAGACAACACAAGGCAAAGGAGGTGCTTATTTCTATGATATACACTTCTGGCTTGGAAAGGATACAAGTCAGGATGAGGCAGGGGCAGCTGCCATCAAGGCTGTTGAACTTGATGCAGCTCTTGGTGGACGTGCAGTGCAGCATAGGGAAGTCCAAGGCCATGAATCTGACAAATTTTTGTCATACTTTAAACCGTGTATAATACCACTAGAGGGAGGTGTTGCATCTGGGTTTAAAAAACCTGAAGAAGAAGTGTTCAAAACACGCTTGTACATATGCAAAGGAAAACGAGTTGTCAGAATGAAACAGGTCCCTTTTGCCCGGTCATCTCTGAATCATGATGATGTATTTATCCTTGACACTCAAAATAAGATTTATCAATTCAATGGGGCAAATTCAAATATACAAGAAAGAGCCAAGGCTTTGGAAGTAACCCAGTTTTTAAAGGAAAAATATCATGAAGGAAAATGTGACGTTGCAATTGTTGATGATGGAAAGTTGGACACAGAGTCAGATTCAGGTGAATTTTGGGTCCTCTTTGGTGGTTTTGCTCCCATTGGGAAGAAGGTCATTGGCGAGGATGATATTATTCCGGAGACTACTCCTGCTCAACTATACTGTATTGCTGATGGTGAGGTCAAACCTGTTGAAGGTGAACCGTCTAAATCACTGTTGGAGAATAACAAATGCTATTTACTGGACTGTGGTGCGGAGGTGTTTGTCTGGGTTGGCCGGGTAACACAAGTTGAAGAACGAAAAGCAGCATGCCAAGCTGCTGAGGAGTTTGTTGCAAGTCAAAATAGGCCAAAATCAACCCGGATAACCAGAATTATTCAAGGTTATGAGACTCATGCGTTCAAGTCCAACTTTGATACTTGGCCATCAGGATCTGCTACTCCTGGCGCTGAGGAAGGGAGAGGAAAAGTTGCAGCTTTGCTGAAGCAACAAGGTATGGGTGTCAAGGGGATAACGAAAAGCACACCAGGCAATGAAGAAGTTCCACCTCTGCTTGAAGGAGGGGGAAAGATGGAGGTATGGCTAATCAATGGAAGTGCCAAGAATCCATTGCCTAAGGAGGATATTGGGAAATTTTACAGTGGAGATTGTTACATAGTATTGTACACTTACCACTCTGGTGAGAGGAAGGAAGACTACTTCTTGTGTTGTTGGTTTGGTAAAGATAGCATTGAGGAAGACCAAAGGATGGCTAGTCGATTGGCCAATACTATGTCCAACTCACTAAAGGGTAGACCTGTTCAGGGCCGCATATTTGAAGGTAAAGAGCCACCACAATTTGTTGCTCTTTTTCAGCCTATGGTGGTCCTTAAGGGAGGTTTGAGTTCTGGTTACAAAAAATTAATAGCAGAGAAAGGTTTGCCAGATGAGACTTACACAGGAGAAAGTATTGCACTTATTCGAATTTCTGGAACTTCAATTCATAACAATAAAGCAGTGCAAGTTGATGCAGTAGGAACATCATTAAATTCTACTGAGTGTTTCCTGCTGCAATCTGGTTCATCAGTTTTCACTTGGCATGGAAGTCAATGTTCTTTTGAACAGCAGCAGCTGGCAGCTAAAATTGCTGAATTTTTAAAGCCAGGAGCTGTGACAAAACATGCCAAGGAAGGGACAGAAAGTTCAGCTTTTTGGTTTGCTCTTGGAGGAAAACAGAGCTTCACCAGCAAAAAGGCCACTAATGAAACTGTTAGAGATCCACATTTGTTCACATTTTTATTAAGCAAAGGGAAGTTTCAGGCAGAAGAGGTTTACAACTTTTCCCAAGATGATCTGTTGACAGAGGATATCCTTATACTTGACACACATGCTGAAGTATTTGTTTGGGTTGGTCAGTCCGTGGATTCAAAAGAAAAACAAAATGCCTTTGATATTGGCCAGAAATATGTAGATAGAGCTGCAGCTCTGGAGGGACTCTCCCCTCATGTACCACTGTATAAAGTTACAGAAGGGAACGAACCTTGCTTTTTCACAACATACTTTTCCTGGGATCATGCGAAAGCTGCTACTCAAGGAAACTCGTTCCAGAAAAAGGTGTCGTTACTTTTTGGGATTGGCCATGTTGTGGAGGATAAGTCCAATGGATCCAGTCAAGGAGGAGGGCCTAGACAAAGAGCAGAAGCTTTAGCTGCTTTATCTTCTGCATTTAATTCACCTTCTGAGAGAACATCCGGCACTGATAGAGATAGACTGAACGGAATAAATCAAGGAGGTCCAAGACAAAGAGCTGAAGCTTTAGCTGCACTGAACTCTGCATTTAATTCACCATCCACAACTAGAACCGTTGCTCCCAGGCCTGCTGGAATAAGTCAAGGATCACAAAGAGCAGCTGCGGTAGCTGCTCTTTCAAACGTTCTTACTGCTGAGAAGAAGAAGCACTCACCTGATTCCTCTCCTGTTGGGCCAGTCAGCAGTCCTGTTGCAGAAAGTAGTGCTTCTGCAGAAGCTAAAAGTGAAAGTGGCCAGTCCGAAACAGAAGGTCCTGAAGAAGTTGTAGATGCTAAGGAGACTGAGGAACTTGCGACTGAAACCGGTAGCAATGAAGATTTAGAACCAAAACAGGAAAATGTTGAGGATGTGAATGATAATCAAAGTAGTCAGAGCACGTTCAGTTATGATCAACTAAAGACCAAATCTAGTAATCCTGTTTCTGGAATAGATTTCAAACGAAGAGAGGCCTATCTGTCAGATGAAGACTTCAATACGGTATTTGGAATGACAAAAGAAGCATTCTATAAATTGCCAAAATGGAAGCAAGATATGCAGAAAAGAAAAGCTGATTTGTTTTAG 2958 0.4236 MSGSTKVLDPAFQAVGQKVGTEIWRIENFQPVPLPKSDYGKFYVGDSYIILQTTQGKGGAYFYDIHFWLGKDTSQDEAGAAAIKAVELDAALGGRAVQHREVQGHESDKFLSYFKPCIIPLEGGVASGFKKPEEEVFKTRLYICKGKRVVRMKQVPFARSSLNHDDVFILDTQNKIYQFNGANSNIQERAKALEVTQFLKEKYHEGKCDVAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVIGEDDIIPETTPAQLYCIADGEVKPVEGEPSKSLLENNKCYLLDCGAEVFVWVGRVTQVEERKAACQAAEEFVASQNRPKSTRITRIIQGYETHAFKSNFDTWPSGSATPGAEEGRGKVAALLKQQGMGVKGITKSTPGNEEVPPLLEGGGKMEVWLINGSAKNPLPKEDIGKFYSGDCYIVLYTYHSGERKEDYFLCCWFGKDSIEEDQRMASRLANTMSNSLKGRPVQGRIFEGKEPPQFVALFQPMVVLKGGLSSGYKKLIAEKGLPDETYTGESIALIRISGTSIHNNKAVQVDAVGTSLNSTECFLLQSGSSVFTWHGSQCSFEQQQLAAKIAEFLKPGAVTKHAKEGTESSAFWFALGGKQSFTSKKATNETVRDPHLFTFLLSKGKFQAEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDSKEKQNAFDIGQKYVDRAAALEGLSPHVPLYKVTEGNEPCFFTTYFSWDHAKAATQGNSFQKKVSLLFGIGHVVEDKSNGSSQGGGPRQRAEALAALSSAFNSPSERTSGTDRDRLNGINQGGPRQRAEALAALNSAFNSPSTTRTVAPRPAGISQGSQRAAAVAALSNVLTAEKKKHSPDSSPVGPVSSPVAESSASAEAKSESGQSETEGPEEVVDAKETEELATETGSNEDLEPKQENVEDVNDNQSSQSTFSYDQLKTKSSNPVSGIDFKRREAYLSDEDFNTVFGMTKEAFYKLPKWKQDMQKRKADLF 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01942 985 Gene3D Severin 614 735 IPR029006 -
Accr5g01942 985 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Accr5g01942 985 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Accr5g01942 985 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Accr5g01942 985 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Accr5g01942 985 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Accr5g01942 985 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Accr5g01942 985 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Accr5g01942 985 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Accr5g01942 985 MobiDBLite consensus disorder prediction 878 914 - -
Accr5g01942 985 FunFam Villin-4 385 520 - -
Accr5g01942 985 Pfam Villin headpiece domain 950 985 IPR003128 GO:0003779|GO:0007010
Accr5g01942 985 ProSiteProfiles Headpiece (HP) domain profile. 920 985 IPR003128 GO:0003779|GO:0007010
Accr5g01942 985 SUPERFAMILY Actin depolymerizing proteins 383 528 - -
Accr5g01942 985 CDD gelsolin_S2_like 138 232 - -
Accr5g01942 985 SMART VHP_1 950 985 IPR003128 GO:0003779|GO:0007010
Accr5g01942 985 SUPERFAMILY Actin depolymerizing proteins 596 718 - -
Accr5g01942 985 Gene3D Severin 133 245 IPR029006 -
Accr5g01942 985 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Accr5g01942 985 FunFam Villin-like 1 614 735 - -
Accr5g01942 985 Gene3D Villin headpiece domain 909 985 IPR036886 GO:0003779|GO:0007010
Accr5g01942 985 SUPERFAMILY VHP, Villin headpiece domain 919 985 IPR036886 GO:0003779|GO:0007010
Accr5g01942 985 CDD gelsolin_S3_like 254 343 - -
Accr5g01942 985 PANTHER VILLIN 5 975 IPR007122 GO:0051015
Accr5g01942 985 MobiDBLite consensus disorder prediction 810 824 - -
Accr5g01942 985 CDD gelsolin_S1_like 12 124 - -
Accr5g01942 985 Gene3D Severin 523 613 IPR029006 -
Accr5g01942 985 MobiDBLite consensus disorder prediction 771 797 - -
Accr5g01942 985 CDD gelsolin_S6_like 622 720 - -
Accr5g01942 985 FunFam Villin-like 1 132 247 - -
Accr5g01942 985 FunFam Gelsolin 521 613 - -
Accr5g01942 985 Gene3D Severin 6 132 IPR029006 -
Accr5g01942 985 Gene3D Severin 246 354 IPR029006 -
Accr5g01942 985 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Accr5g01942 985 SMART VILL_6 392 490 IPR007122 GO:0051015
Accr5g01942 985 SMART VILL_6 625 719 IPR007122 GO:0051015
Accr5g01942 985 SMART VILL_6 251 344 IPR007122 GO:0051015
Accr5g01942 985 SMART VILL_6 19 117 IPR007122 GO:0051015
Accr5g01942 985 SMART VILL_6 137 234 IPR007122 GO:0051015
Accr5g01942 985 SMART VILL_6 518 607 IPR007122 GO:0051015
Accr5g01942 985 Gene3D Severin 388 522 IPR029006 -
Accr5g01942 985 MobiDBLite consensus disorder prediction 915 940 - -
Accr5g01942 985 MobiDBLite consensus disorder prediction 810 831 - -
Accr5g01942 985 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Accr5g01942 985 CDD gelsolin_S5_like 519 609 - -
Accr5g01942 985 Pfam Gelsolin repeat 264 337 IPR007123 -
Accr5g01942 985 Pfam Gelsolin repeat 637 713 IPR007123 -
Accr5g01942 985 Pfam Gelsolin repeat 29 111 IPR007123 -
Accr5g01942 985 Pfam Gelsolin repeat 533 583 IPR007123 -
Accr5g01942 985 Pfam Gelsolin repeat 405 483 IPR007123 -
Accr5g01942 985 Pfam Gelsolin repeat 149 217 IPR007123 -
Accr5g01942 985 CDD gelsolin_S4_like 386 487 - -
Accr5g01942 985 FunFam Gelsolin 6 131 - -
Accr5g01942 985 FunFam Villin-4 248 354 - -
Accr5g01942 985 MobiDBLite consensus disorder prediction 854 877 - -
Accr5g01942 985 SUPERFAMILY Actin depolymerizing proteins 511 613 - -
Accr5g01942 985 MobiDBLite consensus disorder prediction 843 940 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01942 Accr-Chr5 45763007 45772273 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01942 - - gmx:100788765 1622.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02609 2 61724216 61733121 Accr5g01942 5 45763007 45772273 CCT
Accr5g01942 5 45763007 45772273 Accr5g01942 5 45763007 45772273 ECH