Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g01724 ATGGAGAACATATGGATTTTGAAATGGGTATTGCTGATTTGGATCATGTGTCCTCATGTGGAAGGGCTTGGTGTAAATTGGGGTACTCAGGCCACTCATCAGCTGCCTCCAGACACGGTGGTTCAAATGTTGAAGGACAATGGAATTCAAAAGGTGAAGCTGTTTGATTCAGCTGATAACACCATGAATGCTCTGGCTGGTACGGGGATCGAAGTCATGGTTGCCATTCCTAACAATCAGCTTGCTGAGATGAATGACTATGATCGAGCCAAACAGTGGGTGAAAAAGAACATTACGCGTTACAACTTCAAAGGAGGTGTTAACATCAAGTATGTCGCAGTTGGGAATGAACCATTTTTAAAATCCTATAACAATTCATTCTTGAATATCACATTCCCAGCACTACAGAACATTCAGAATGCCCTTAACGAAGCTGGTGTTGGAGACACCATAAAAGCCACAGTGCCCTTAAATGCTGATGTATACGAGTCCCCAGCAAATAATGCTGTTCCTTCTGCTGGAAGATTCAGGGCTGATATAAACGATCTCATGACTCAGATAGTCCAATTCATGAACAAGAATGGTGCGCCATTCACCGTAAATATCTACCCTTTCTTAAGTCTTTACGGGAACGATGATTTCCCTTTCAACTACGCTTTCTTTGATGGCGTTACCACCCCTGTAATCGATAGTGGGATTCAATACACAAATGTGTTTGATGCAAACTTTGACACCTTGGTTTCTGCTCTGAAGGCAGCAGGATCCGGAAACATGACCATTTTGGTAGGAGAAGTAGGGTGGCCTACAGATGGGGACAAGAATGCCAATGTAGGCAATGCTTTAAGGTTTTACAACGGGCTTTTGCCGAGGCTCGCCGCAAATAAAGGCACGCCACTTCGCCCTGGATTCATTGAAGTTTATCTGTTTGGACTTATTGATGAAGATGCCAAGAGCATTGCTCCTGGTAACTTCGAGCGTCACTGGGGAATATTCAGGTATGATGGGCAGCCCAAGTTTCCCATGGATCTTTCTGGTCAGAATCAGAACAAATTACTAGTGGGAGCGCAGAATGTGAAATATCAATCTTCAAAGTGGTGCATGTTTAACCCAGATGCCAAAGATCTCTCTAAACTTGCTGATAATATTAACTTTGCCTGTACCTATGGGGACTGTACAGCACTGGGATATGGGTCTTCTTGCAACAACCTGGATGCTAATGGCAATGCCTCTTATGCATTCAACATGTATTACCAGGTGCAAAATCAGGATGACATGGCCTGCAATTTTCAAGGTTTGGCCAAGATTAGCGAACAGAATATTTCAACGCCCACGTGCAATTTTGTGATTCAGATTTCGTCATCCTCTTCTCTGATGTCATCATTGGTTGCTTCCTTATTTATTACATTATTATCCATGGTTCTATTTCTATAG 1431 0.4291 MENIWILKWVLLIWIMCPHVEGLGVNWGTQATHQLPPDTVVQMLKDNGIQKVKLFDSADNTMNALAGTGIEVMVAIPNNQLAEMNDYDRAKQWVKKNITRYNFKGGVNIKYVAVGNEPFLKSYNNSFLNITFPALQNIQNALNEAGVGDTIKATVPLNADVYESPANNAVPSAGRFRADINDLMTQIVQFMNKNGAPFTVNIYPFLSLYGNDDFPFNYAFFDGVTTPVIDSGIQYTNVFDANFDTLVSALKAAGSGNMTILVGEVGWPTDGDKNANVGNALRFYNGLLPRLAANKGTPLRPGFIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFPMDLSGQNQNKLLVGAQNVKYQSSKWCMFNPDAKDLSKLADNINFACTYGDCTALGYGSSCNNLDANGNASYAFNMYYQVQNQDDMACNFQGLAKISEQNISTPTCNFVIQISSSSSLMSSLVASLFITLLSMVLFL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g01724 476 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Accr5g01724 476 Gene3D Glycosidases 22 351 - -
Accr5g01724 476 FunFam Glucan endo-1,3-beta-glucosidase 5 22 349 - -
Accr5g01724 476 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Accr5g01724 476 SMART X8_cls 364 447 IPR012946 -
Accr5g01724 476 Pfam X8 domain 364 433 IPR012946 -
Accr5g01724 476 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 435 IPR044965 GO:0004553|GO:0005975
Accr5g01724 476 Gene3D - 358 460 - -
Accr5g01724 476 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Accr5g01724 476 FunFam Glucan endo-1,3-beta-glucosidase 8 360 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g01724 Accr-Chr5 43593854 43596328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g01724 6 475 Miscellaneous Gene Families AT1G64760 71.489 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g01724 - - gmx:100815300 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g02863 2 64508344 64511047 Accr5g01724 5 43593854 43596328 CCT