Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00977 ATGGAAATGCACATTATGGACTCAGATTGGGAGACTTTCAGTGAGAGCACCAGCAGTGAGGATCAAGAGGAAATTGATTTTCTATATGCTGGGCAAGCTCGGAGCATACTATCCAGTTTAGAGGAAAGCATTGGGAAAATTGATGATTTCCTTTCATTTGAAAGAGCATTTGTTCATGGGGATGTGGTTTGTTCCTTGTCAGATCCATCTGGACAGATGGGCAGGGTTACAGGTGTTGATATGTTTGTGGATTTGGAAAGTGTTCATGGAAAATTATTAAAAAATGTAAACTCCAAGAGGCTTTTGAAAATCCGCTCCATCTCAGAAGGTGATTTTGTGATTAAGGGGCCATGGCTTGGAAGAGTTCAAAAGGTGGTGGACAAAGTAACTGTATTATTTGATGATGGAGCTATATGTGAGGTCACCACATTGGAAAGAGATAAGATCTCGCCTCTGACTCGTAATTTGCTTGAAGACTTACAGTATCCATTCTATCCAGGGCAGAGAGTAAAGGTTAATTCCTCATCTTCTTCTAAGCCAGCTAGATGGTTATGTGGAACTTGGAGAGACAGTCAAGATGAAGGAACCATTTGTTCTGTTGAAGCAGATCTAGTGTGTGTTAACTGGCTCATGTTTGTTCCCATGGATCCTGATTTTCCGGTAAATGCTCCCCCACGCTGGCAAGATTCCAAAAACTTGACATTGCTCTCATGTTTTTCACATGCAAACTGGCAGCTTGGTGACTGGTGCATGCTTGCAGTGGCAGACCAAGAGGAACAGATGGAACAGAATTTCGGAAATACATCTACAAGGGGTCTAACTAAGGAAAACACTATGACAAGAGGATATAAAAATGGAAACGTTCACTTCAATATTGGGGAACTTTTCGTAATTGGGAAAATAAGGACCAAAGTCGATATTGTATTGCAGGATGGTGAGCAGACTTTGGGAATCGATCCCCATACTCTACTCCCAGTGAATGTCATAGACACTCATGAATTTTGGCCTCAGCAGTATGTGTTGGAAAAAGGTGCTTCTGATGATCATCCTAAGCCCTGCTGTCAAAGATGGGGAGTTGTTCTGTCAGTGGATTCCAAAGAGCGTACTGTAAAGGTACAATGGAATACTGTTTCCATATCCATGCCAGAGAATTTGGCTGGAGATAGGATGGAGGAGACTGTGAGTGCCTACGAACTCATAGAGCACCCAGACTACTCCTATTGTTTTGGTGATATTGTATTCAAGGCTCAAAAACAGCTTGGTTACCAAGCTGAGAAAGCTCAACCAAAGTCAGCAACTGACTTGAATGTGGAGGCTGCTCTTATGGACAGGAACCACATCAGTTATCAGAATGAGTTCCCTGATAACCACATCAGTTATCAGAATGAGTTCCCTGATAACTGCTACCTATCCTGCATTGGCAACGTTGTTGGTTTCAAAGATGGTGCTGTAGAGGTGAAATGGGCTACTGGTTTAACAACCAAGGTTGCACCTCATGAAATTTTTCGAATTGATAAGCATGAAGGTTCAACTGAAACCCCTGTTCCAAATGAAGCAGATGAGGAGTTGACTCAAGAGATGACTGAGCTTGGAAGTCTAATTTCTGACAAAAAGGGAAAGGGCTTGTTAGATTGTGATGGTGATAGAGTGAATTGTGAAAGGCATCCAGGGGAATCTAGTAACTTTTCCCTTCCTCGAGCTGCCATTGAAATTTTCTCCAGCATTAAGGCTGGCATTTTTCGGACATTTGGGGTAACATCACTTTCACCAGCAGTTTCTTTAGTCCCTACAACTGAAGAGGGAAATCAGTCTGACAATCTTAGCAAGAAAGAGGTTTCAGAAACTTGTGAACTTTGCACTGAAGCAAATCCAATGAGTGACTTGCAGTCTGCTGAAGACATGACTCCAGATCAGGATGTTATTAGTTTTTCTGCGAGGAAAGATCTTCCATTTTCTTCAAATAGCAACAATTCAGATGGGTTTAAGGAGTTTGATATAATAGATAATTGTTCAGACCACCACTTCTTTCATGAGCAAAAAGGGTTGGCATTATCTCAGGTAAAAAGAGGATGGGTGAAAAGGATTCAACAAGAATGGAGCATCCTAGAGAGAAATCTTCCAGAAACTATTTATGTCCGTGTGTTTGAAGAAAGATTGGATCTCCTGCGAGCAGCTATTGTTGGTGCACCTGGAACTCCTTATCATGATGGCTTATTCTTCTTTGATGTTTGTTTCCCTCCAGAGTATCCTAATGAACCACCAATGGTGCACTACCATTCTGGTGGTCTCAGATTAAACCCTAATCTGTACGAATCGGGAAATGTCTGTCTGAGCCTCCTGAATACATGGACCGGTACTGGCAGTGAAATGTGGAACCCGGGGGCCTCCACAATTCTTCAAGTCCTTCTCTCTCTGCAGGCCCTTGTCCTTAATGAAAAGCCTTATTTCAACGAGGCTGGATATGACCAGCAGATTGGCAGAGCCGAAGGAGAGAAGAACTCAGTGAGCTACAATGAAAATGCATTCCTCGTCACCTGCAAATCAATGCTTTATCTACTGAGAAAGCCACCCAAGCATTTTGAGTTACTCGTGGAAGAGCATTTCAGTCAACGCGCGCAACACATACTTGTTGCTTGTAAGGCGTACGGCGAAGGAGCTGCCATTGGATGTGCTTTTGACTGTGGAAAAGCCATGGACCAAAATCAGAAGGGAACTTCTACAGGTTTCAAAATCATGCTTGCTAAGCTCTTCCCCAAGCTCGTCGAGGCTTTTTCCGGTAAAGGAATTGATTGCAGCCAGTTTGTTCAGTTGCAGAAGTAA 2820 0.428 MEMHIMDSDWETFSESTSSEDQEEIDFLYAGQARSILSSLEESIGKIDDFLSFERAFVHGDVVCSLSDPSGQMGRVTGVDMFVDLESVHGKLLKNVNSKRLLKIRSISEGDFVIKGPWLGRVQKVVDKVTVLFDDGAICEVTTLERDKISPLTRNLLEDLQYPFYPGQRVKVNSSSSSKPARWLCGTWRDSQDEGTICSVEADLVCVNWLMFVPMDPDFPVNAPPRWQDSKNLTLLSCFSHANWQLGDWCMLAVADQEEQMEQNFGNTSTRGLTKENTMTRGYKNGNVHFNIGELFVIGKIRTKVDIVLQDGEQTLGIDPHTLLPVNVIDTHEFWPQQYVLEKGASDDHPKPCCQRWGVVLSVDSKERTVKVQWNTVSISMPENLAGDRMEETVSAYELIEHPDYSYCFGDIVFKAQKQLGYQAEKAQPKSATDLNVEAALMDRNHISYQNEFPDNHISYQNEFPDNCYLSCIGNVVGFKDGAVEVKWATGLTTKVAPHEIFRIDKHEGSTETPVPNEADEELTQEMTELGSLISDKKGKGLLDCDGDRVNCERHPGESSNFSLPRAAIEIFSSIKAGIFRTFGVTSLSPAVSLVPTTEEGNQSDNLSKKEVSETCELCTEANPMSDLQSAEDMTPDQDVISFSARKDLPFSSNSNNSDGFKEFDIIDNCSDHHFFHEQKGLALSQVKRGWVKRIQQEWSILERNLPETIYVRVFEERLDLLRAAIVGAPGTPYHDGLFFFDVCFPPEYPNEPPMVHYHSGGLRLNPNLYESGNVCLSLLNTWTGTGSEMWNPGASTILQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGEKNSVSYNENAFLVTCKSMLYLLRKPPKHFELLVEEHFSQRAQHILVACKAYGEGAAIGCAFDCGKAMDQNQKGTSTGFKIMLAKLFPKLVEAFSGKGIDCSQFVQLQK 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00977 939 SUPERFAMILY UBC-like 682 859 IPR016135 -
Accr5g00977 939 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 3 931 - -
Accr5g00977 939 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 690 850 IPR000608 -
Accr5g00977 939 FunFam Probable ubiquitin-conjugating enzyme E2 23 652 928 - -
Accr5g00977 939 Pfam Ubiquitin-conjugating enzyme 694 841 IPR000608 -
Accr5g00977 939 CDD UBCc 692 845 IPR000608 -
Accr5g00977 939 Gene3D Ubiquitin Conjugating Enzyme 653 931 IPR016135 -
Accr5g00977 939 SMART ubc_7 693 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00977 Accr-Chr5 35186241 35193302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00977 21 933 Miscellaneous Gene Families AT2G33770 49.294 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00977 K10581 - gmx:100805463 1339.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00977 5 35186241 35193302 Accr5g00977 5 35186241 35193302 ECH