Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00913 ATGGGATTGCATGCAAAAATTTGGCACAACGTTGCTGGGCCTGCATGCGACGTGTTCATAAACCACCGTACGGTCGACACGAGACGTTCGGTGGTTCGTTTGTTGTACAACCATCTGACGCAGCAAGGATGCAAGCCGTTCTTGGACGCAGAAAACCTGAGACCAGGAGATAGGTTGTTGGACACTATTGATAAGGCTATACGAGGATGTAATGTTGGGGTTGCTGTGTTTTCGCCTCGTTATTGTGACTCCTATTACTGTCTCCATGAACTCTCACTCATCATGGAATCAAAGAAACGAATCGTTCCTATTTTCTATGATGTGAAGCCGTCGCAGCTTCGGATTGTGGACAGTGGAATATTGAGTTATTCACAGAAAGATCTCAGGAGGTTTAATTTTGCAATTAAAGAAGCTAAAAGCATTGTGGGTCTGCCCTTCGATTCCTCAAAAGATGACTGGTCGGAGCTGGTACGTAAAGCATCAAATGCAGTGATGAGCAAATTGCATGAAGAAAGCAGTGCATGA 525 0.4495 MGLHAKIWHNVAGPACDVFINHRTVDTRRSVVRLLYNHLTQQGCKPFLDAENLRPGDRLLDTIDKAIRGCNVGVAVFSPRYCDSYYCLHELSLIMESKKRIVPIFYDVKPSQLRIVDSGILSYSQKDLRRFNFAIKEAKSIVGLPFDSSKDDWSELVRKASNAVMSKLHEESSA 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00913 174 SMART till_3 15 163 IPR000157 GO:0007165
Accr5g00913 174 Pfam TIR domain 17 169 IPR000157 GO:0007165
Accr5g00913 174 Gene3D - 13 173 IPR035897 -
Accr5g00913 174 PANTHER TMV RESISTANCE PROTEIN N-LIKE 16 148 - -
Accr5g00913 174 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 114 IPR035897 -
Accr5g00913 174 ProSiteProfiles TIR domain profile. 14 164 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00913 Accr-Chr5 34267702 34269339 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00913 14 164 Miscellaneous Gene Families AT1G57670 26.380 1.88e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00913 - - qsa:O6P43_012602 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00915 5 34351874 34352667 Accr5g00913 5 34267702 34269339 CCT
Accr5g00913 5 34267702 34269339 Accr5g00913 5 34267702 34269339 ECH