Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00880 ATGTCCTTATATTGTTCAAGCTCTGGTACAGTAATCCCACGTTCCCTCGTGGGAAAAGCAAGAAGAAATAGCGGCTTCGAAGCACCAAGTTCCTTCTCCTTCCATTATAAATTACTCCATAACTTGTCAAGGCACATTGGGTTTGTACCAAAATTTGACCTTACTTCTTGTTCTTGTTCTTCTTCTCTGATGGAGGATGACCATAAAAACCTGGGTTTTGTGTCCGAAGCAGAGGACTATTCGAAGGAATTGGATGTTGCTGTTAGAGCGGTTCAGATGGCTTGCTCCCTCTGCCAGAAAGTGCAGGAAAATTTGATTGTTCAGTCCAAGAGTGACACTCAGGTCCATTCCAAGGACGACAATTCTCCAGTCACTGTTGCAGATTGGAGCGTCCAAGGAGTTGTAAGCTGGATACTGTCCGAGTGCTTAGGGAGTAAAAACATGTCAATTCTTGCTGAAGAAGATGTTGAAACTCTCTCCAAGACTAGTTCATCAGGACTGTTGGAAGCTGTGGTTAAGACTGTAAATGAATGTCTAGCTAAGGCGCCTCAGTTCGGGGTTGAAGCCCCAAAATCAGCTCTCAGTGCTTCCGAGGTTCTTGAAATCATCAGCCGCTGCAACTCGGTTGGTGGTCCTGCCGGAAGATTTTGGGTGCTTGATCCTGTTGATGGCACGCTGGGGTTTGTACGTGGAGATCAATATGCTATAGCTCTTGCACTCATAGAGGATGGAGAGGTAATGCTTGGAGTTCTTGGGTGTCCCAACTACCCATTGAGAAAGGAATGGTTAACCTATCATCATCGCTATCATAGGATTATATCTAAGCTCACTCCTCCGACTTCTGAAACTTGGGACAAAGGTTGTGTGCTATATGCCAGAAAGGGAAGTAGCAGGGCTTGGATGCAACCACTGGTCCAGTGCAACAAGAAGTTTGTGTGGCCAAATCATGCAAGACAAGTTTCAGTTTCTTCCATTGACGACCCGGCGTTGGCAACTTTTTGTGAACCTGTTGAGAAGGCAAATTCAAGCCACTCTTTCACTGAGGGACTAGCCCATAGTGTTGGTCTCAGGAAGCAGCCACTGAGGGTGTACAGCATGGTGAAATATGCAGCGATAGCTCGTGGCGATGCCGAGGTTTTCATGAAGTTTCCAAGGTCTGGTTACAAGGAGAAGATATGGGATCACGCCGCCGGTGTTGTCATCATACAAGAGGCGGGTGGCGTGGTGACAGACGCCAGAGGCCGTCCACTAGACTTCTCAAAAGGTGCATATTTGGAAGGTCTTGACCGGGGAATAGTTGCCTGTGCCGGAGCCTCACTACATGAAAAGATCATAGATGCTCTTGATGCTAGCTGGGCTTCTTCTTGCCTTTGA 1374 0.4716 MSLYCSSSGTVIPRSLVGKARRNSGFEAPSSFSFHYKLLHNLSRHIGFVPKFDLTSCSCSSSLMEDDHKNLGFVSEAEDYSKELDVAVRAVQMACSLCQKVQENLIVQSKSDTQVHSKDDNSPVTVADWSVQGVVSWILSECLGSKNMSILAEEDVETLSKTSSSGLLEAVVKTVNECLAKAPQFGVEAPKSALSASEVLEIISRCNSVGGPAGRFWVLDPVDGTLGFVRGDQYAIALALIEDGEVMLGVLGCPNYPLRKEWLTYHHRYHRIISKLTPPTSETWDKGCVLYARKGSSRAWMQPLVQCNKKFVWPNHARQVSVSSIDDPALATFCEPVEKANSSHSFTEGLAHSVGLRKQPLRVYSMVKYAAIARGDAEVFMKFPRSGYKEKIWDHAAGVVIIQEAGGVVTDARGRPLDFSKGAYLEGLDRGIVACAGASLHEKIIDALDASWASSCL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00880 457 Gene3D - 321 451 - -
Accr5g00880 457 Pfam Inositol monophosphatase family 120 452 IPR000760 -
Accr5g00880 457 ProSitePatterns Inositol monophosphatase family signature 2. 393 407 IPR020550 GO:0046854
Accr5g00880 457 SUPERFAMILY Carbohydrate phosphatase 79 450 - -
Accr5g00880 457 PRINTS Inositol monophosphatase superfamily signature 390 414 IPR000760 -
Accr5g00880 457 PRINTS Inositol monophosphatase superfamily signature 217 233 IPR000760 -
Accr5g00880 457 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 80 455 IPR006239 GO:0006790|GO:0008441
Accr5g00880 457 FunFam PAP-specific phosphatase HAL2-like 321 454 - -
Accr5g00880 457 FunFam PAP-specific phosphatase HAL2-like 78 310 - -
Accr5g00880 457 Gene3D - 78 311 - -
Accr5g00880 457 PANTHER PHOSPHATASE 68 455 - -
Accr5g00880 457 CDD PAP_phosphatase 83 448 - -
Accr5g00880 457 ProSitePatterns Inositol monophosphatase family signature 1. 217 230 IPR020583 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00880 Accr-Chr5 33755879 33758613 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00880 K01082 - gmx:100776247 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00880 5 33755879 33758613 Accr5g00880 5 33755879 33758613 CCT
Accr5g00880 5 33755879 33758613 Accr5g00880 5 33755879 33758613 ECH