Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00783 ATGGCTTCGTCGGAGATCGAGGTGGTGTCATCGGACTCTAAAACTCCGAAAGTTTCCGATGCACCTCAAGTAGTAGACGTGTTTTCTGCCTGTGTTTGTGGGGATTTGGAGAAATTGAGGTGGTTTGTGGAACAAGAAGGTGCCTCCTTTTCTGTTCCTGATACCAATGGCTATTATGCTCTCCAATGGGCATGCCTTAATAACTTTCCAGATATTGTGCAGTATGTCATTACGCACGGGGGCGATGTCAACGCTACTGACCACATGCAACAAACGGCACTACACTGGGCAGCAGTTCGTGGTGCAACTACAGTTGCTGATTTGCTCTTGGAGAACGGTGCCCGGCTTGAGTCTGCTGATATATATGGATACAGGGCAGTTCATGTTGCTGCTCAACATGGACAAACAACTTTCTTAAATCACCTCATTGCAAAGTATAATGCTGACTTTGATGCACCCGATAATGAGGGACGAAGTCCTCTACATTGGGCTGCCTACAAGGGGTTTGCTGATACAGTCCGATTGCTTCTGTTCCGGGATGCATGCCAAGGGAGACAAGATAAAGATGGTTGTACGCCATTGCACTGGGCTGCTTTAAGTGGAAATGCGGAGGCATGCACTGTACTTGTACACTCAGGCACAAAGAAAGAACTGGTGGTGAAGGACAAAGCTGGATTTACTCCTGTACAGCTTGCACACGATAAAGGTCATCGGCATGTCGCCCTTTTGCTTTCTAATCAACAGAGAGCTCTGAGCAACCGCTGGAGAGACAAAATTTGTTGTGGGAGGATGACAGATATTGGTTATGCTCCCATTTTATTTTGTATTATAATCTTTGAAATGTTCCTCTTCACGAACTCAGTCGTTGCAGGTTCTAGCTTTCAAAAGATTACAGCTGATGTTGGCCTTTGGGCTTGGACAGCTCTTTCTCTGGCAGCTGGTTCCTTGATTATGTTCTATAGGTGCAGTAGTAAAGATCCTGGTTATATAAAACGACCGGGAGATTCAGGTGCTCATGGTGATGTAGAGGATCCTTTGTTGAATATTGACTTGAACAGCTCCTCTGTTTGGACAGGAAATTGGTCTCAACTTTGCCCAACCTGCAAGATAATAAGAGCTGTCCGATCTAAGCATTGCCCTACTTGTAAGTGTTGTGTGGAACAATTTGACCACCATTGCCCATGGATATCTAACTGTGTGGGAAAGAGGAACAAAAGGGATTTCTTTATTTTTGTTTGCCTGGCAACTTTGGCATCATTCATTAGTGGTGCTGTTACGGTTCAAAGAATTCGTACATCATCTCTCGGAATGTCAGAAGGAGAAACATGGATCCATCATATGTTAGTACAGCATCCTGGTGCTATTGCATTTCTGGTGCTGGACACTTTTATATTCATTGCTGCTGTAACTTTGACATTTACACAGGCTTCAATGATAGCTCGGAATATCACCACAAATGAAGTGGCAAACTCTAAGCGATATGTGTATCTTCGCGGTCCTGATGGAAAGTTTAGAAATCCGTACAACCATGGCTGTTGGAAGAATTGTTCTGACTTCTTTCTTCAGGGCTATACAAATGATGGTGAAGTCTCTTGGCCTCCATTACAGCAGGTAGCGGTGGCGACGTAG 1629 0.4469 MASSEIEVVSSDSKTPKVSDAPQVVDVFSACVCGDLEKLRWFVEQEGASFSVPDTNGYYALQWACLNNFPDIVQYVITHGGDVNATDHMQQTALHWAAVRGATTVADLLLENGARLESADIYGYRAVHVAAQHGQTTFLNHLIAKYNADFDAPDNEGRSPLHWAAYKGFADTVRLLLFRDACQGRQDKDGCTPLHWAALSGNAEACTVLVHSGTKKELVVKDKAGFTPVQLAHDKGHRHVALLLSNQQRALSNRWRDKICCGRMTDIGYAPILFCIIIFEMFLFTNSVVAGSSFQKITADVGLWAWTALSLAAGSLIMFYRCSSKDPGYIKRPGDSGAHGDVEDPLLNIDLNSSSVWTGNWSQLCPTCKIIRAVRSKHCPTCKCCVEQFDHHCPWISNCVGKRNKRDFFIFVCLATLASFISGAVTVQRIRTSSLGMSEGETWIHHMLVQHPGAIAFLVLDTFIFIAAVTLTFTQASMIARNITTNEVANSKRYVYLRGPDGKFRNPYNHGCWKNCSDFFLQGYTNDGEVSWPPLQQVAVAT 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00783 542 FunFam S-acyltransferase 143 251 - -
Accr5g00783 542 PANTHER ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED 24 526 - -
Accr5g00783 542 ProSiteProfiles Ankyrin repeat profile. 189 221 IPR002110 GO:0005515
Accr5g00783 542 FunFam S-acyltransferase 11 142 - -
Accr5g00783 542 ProSiteProfiles Ankyrin repeat profile. 89 121 IPR002110 GO:0005515
Accr5g00783 542 ProSiteProfiles Ankyrin repeat region circular profile. 156 177 - -
Accr5g00783 542 ProSiteProfiles Ankyrin repeat profile. 122 155 IPR002110 GO:0005515
Accr5g00783 542 Pfam Ankyrin repeats (3 copies) 128 216 IPR002110 GO:0005515
Accr5g00783 542 Pfam Ankyrin repeats (3 copies) 30 118 IPR002110 GO:0005515
Accr5g00783 542 Gene3D - 129 193 IPR036770 -
Accr5g00783 542 ProSiteProfiles Ankyrin repeat region circular profile. 89 120 - -
Accr5g00783 542 ProSiteProfiles DHHC domain profile. 363 413 - -
Accr5g00783 542 ProSiteProfiles Ankyrin repeat region circular profile. 56 87 - -
Accr5g00783 542 ProSiteProfiles Ankyrin repeat profile. 56 88 IPR002110 GO:0005515
Accr5g00783 542 Pfam DHHC palmitoyltransferase 363 491 IPR001594 GO:0016409
Accr5g00783 542 SMART ANK_2a 89 118 IPR002110 GO:0005515
Accr5g00783 542 SMART ANK_2a 122 152 IPR002110 GO:0005515
Accr5g00783 542 SMART ANK_2a 224 253 IPR002110 GO:0005515
Accr5g00783 542 SMART ANK_2a 56 85 IPR002110 GO:0005515
Accr5g00783 542 SMART ANK_2a 189 218 IPR002110 GO:0005515
Accr5g00783 542 SMART ANK_2a 156 185 IPR002110 GO:0005515
Accr5g00783 542 SUPERFAMILY Ankyrin repeat 28 246 IPR036770 -
Accr5g00783 542 Gene3D - 24 128 IPR036770 -
Accr5g00783 542 Gene3D - 194 247 IPR036770 -
Accr5g00783 542 ProSiteProfiles Ankyrin repeat region circular profile. 189 213 - -
Accr5g00783 542 ProSiteProfiles Ankyrin repeat profile. 156 188 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00783 Accr-Chr5 32257323 32268892 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr5g00783 30 237 Miscellaneous Gene Families AT2G31820 27.778 7.71e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00783 K20032 - gmx:100798740 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00783 5 32257323 32268892 Accr5g00783 5 32257323 32268892 ECH