Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00777 ATGGAGCTGAATAACATTAGAGATGCATTTGACCGTGTATCTAAGAAGCAAAAGTTGTCTACTTCTAAGCTCCAAGAAGTCATTGATCAGGTGGGGTTCGAAATTGAGCAGGCTTTGGCTAAAATTCAGTCAGCTCAAGACTCAGGCCCTGTAGACCAGAAATCTATACTTACAGATCTTAAGTTTAAACTTAATGCCATTGGAGCACTGCAACAGTTAGAAGGACCACAGAAAGAATTGAACATTAGTCTTACCAAGTACCAAAAACTTCTGGAGAAAACCTTAAATCCTGATGTATCCAAGGCATACAGAAATGTTGACTTTGACTTTCACATTGTGAATCAGATCATAGCAAACCATTTTTATCGTCAAGGGCTATTTGATCTTGGAGACAGCATCATAAATGAGGCTGGGGAATCAAATTCAAATTCATTAAGATCTCAATTCCTGGAAATGCATCAGATTCTTGAAGCTATGAGAGTTAAGAACCTTCAACCTGCTCTCACATGGATCTGTGCCAACCAAGCCAAACTTGCCCAGAGTGGTTCCAATCTCGAACTTAAGCTTCATAGGCTGCAATTTGTAGAGGTCTTGCTAAATGGAACTCAAGCCGATGCCTTAAAATATGCCCGAACTTATCTTGCTCCTTTTGCTTCCCTCCACAAGGATGAGTTCCAAAAGCTTATGGGTTGCCTCTTGTATGCAGGAAGGCTTAATAACTCCCCTTATTCTGAGTTGATGTCCCAAACCCATTGGGAGAGGGCTACTGAAGAGCTGACACGGCAGTTCTGCGTTTTCCTGGGACAGTCCTACGAGAGCCCATTGAGTGTGGCAGTTGCCGCAGGAGTTGAAGGGTTGCCTACACTCTTGAAACTGGCAAATGTAATGGCTGCAAAGACTCAAGAGTGGCAGGCGATGAAACAGTTGCCAGTGTCCGTAGAACTGGGGAAGGAATTTCAGTTCCATTCTGTTTTTGTCTGCCCTGTGAGTCGCGATCAAGCAAGTGAAGAGAATCCTCCAATGTTGCTTCCATGTTTACATGTTCTTTGCAAGCAATCAATCATGAAGTTGTCGAAAAGCAGCACCCGAGCGTTCAAATGTCCTTACTGCCCAGCAGAAGCCACAGTTGCACAGTGCAGACAGCTTTATTTCTGA 1155 0.4355 MELNNIRDAFDRVSKKQKLSTSKLQEVIDQVGFEIEQALAKIQSAQDSGPVDQKSILTDLKFKLNAIGALQQLEGPQKELNISLTKYQKLLEKTLNPDVSKAYRNVDFDFHIVNQIIANHFYRQGLFDLGDSIINEAGESNSNSLRSQFLEMHQILEAMRVKNLQPALTWICANQAKLAQSGSNLELKLHRLQFVEVLLNGTQADALKYARTYLAPFASLHKDEFQKLMGCLLYAGRLNNSPYSELMSQTHWERATEELTRQFCVFLGQSYESPLSVAVAAGVEGLPTLLKLANVMAAKTQEWQAMKQLPVSVELGKEFQFHSVFVCPVSRDQASEENPPMLLPCLHVLCKQSIMKLSKSSTRAFKCPYCPAEATVAQCRQLYF 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00777 384 ProSiteProfiles Gid-type RING finger profile. 327 370 IPR044063 GO:0061630
Accr5g00777 384 Pfam RING-type zinc-finger 327 368 IPR027370 -
Accr5g00777 384 FunFam Regulator of gluconeogenesis Rmd5 319 383 - -
Accr5g00777 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 316 383 IPR013083 -
Accr5g00777 384 SMART toby_final6 201 295 IPR013144 -
Accr5g00777 384 SMART ring_2 327 370 IPR001841 -
Accr5g00777 384 SUPERFAMILY RING/U-box 321 381 - -
Accr5g00777 384 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 148 205 IPR006595 -
Accr5g00777 384 ProSiteProfiles Zinc finger RING-type profile. 327 370 IPR001841 -
Accr5g00777 384 PANTHER MACROPHAGE ERYTHROBLAST ATTACHER-RELATED 1 383 IPR045098 GO:0004842|GO:0043161
Accr5g00777 384 SMART ctlh 148 205 IPR006595 -
Accr5g00777 384 CDD dRING_Rmd5p-like 325 373 IPR037683 -
Accr5g00777 384 Pfam CTLH/CRA C-terminal to LisH motif domain 148 289 IPR024964 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00777 Accr-Chr5 32173604 32174758 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00777 K23333 - gmx:100799584 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00777 5 32173604 32174758 Accr5g00777 5 32173604 32174758 ECH