Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00684 ATGTCAAGCCATAAAGAGAAAACTAACCAACAAACACAAGAAGCTATGTTTAGATATAAGAAGTGCAGAAACCAAAATAAAGGGGAGGCACAAATCATCTGCTGCAACTGCAAGGGAGAGTTTCATGTGCCTCCAACCACAACCACATACCGTTGTCCTCGGTGCCAAGCAATCACTGCTAGTTCATCAAGAAATGTGCAATCAAATAAAGATAGGGGCAATGAAATGGGGTTGGTGAAATCTTCTTTTCCCACTAAGAATATCATCAAATCTGATCATATATCACAGAATGCTAGCAAAAGTGAATATGTTCTGAATCGAAGCCCGCGTTCATTTTCATTGGTTTGCTCTTTCTCCCCATCTGGACGAAGCAATAAGCGTGCGGTTCTCTGTGGAGTTACTTACAGGAAAAAGAGGTACAGACTCAAAGGACCTGTTAATGATGTTGCCAACATGAGGGAGCTTCTGGTGAAGGTTTTTGACTTTCCTACTGAATGTATACATGAGCTCACAGAAGAGAAACAGTGTGTAAATTTCCATCCAACAAAGACAAACATACTGCGAGAATTGGAGTGGCTTGTGGAAGGCTGCCAGAAAGGAGACTCACTGGTGTTTTACTTCTCAGGACATGGCATCCAAGAAACAGATTCTAAAGAAGATGAGATAGATGCGATGGACGAAAGCATTTGCCCGGTTGATTTTCTGCATGAAGGGACGATTCTCGACAATGAATTGAACTCCATACTTGTTTGGCCCCTCGTAGAAGGTGTCACACTTCATGTCATTGCTGATACTTGTCATAGTGGAACAGTCCTTGATCTCTCATATGTCTATGATCCTGAAAAATTCACATGGAAAAATAACAAGCCTCCTTCCAAAGAACCTTCCAGAAAGAATCCGAGTGGGGGACGGGCAATTTGTGTTAGTGCTTGTCAAGATCATCAGATGGCTGCTGATACTTCAGCTTTCAAAGGGAAGGGAATGAATGGTGTGATGACATATCTTTTCACAAAAGTCATCAAACAAAAACCTGATATAACATATGGGGGTTTAATGGAACAGATGGGGAAGGAAATTGAAGAGATTATGAGAAATAATTGTCGTCCATCTTTCTTGCAACATATGTTTCGTCCCAGAATTGTGCAGGATACTGTTATATCATCGTCTGAAGAGTTTGATCTTTTTGGGACTATATTCACATTATGA 1206 0.4088 MSSHKEKTNQQTQEAMFRYKKCRNQNKGEAQIICCNCKGEFHVPPTTTTYRCPRCQAITASSSRNVQSNKDRGNEMGLVKSSFPTKNIIKSDHISQNASKSEYVLNRSPRSFSLVCSFSPSGRSNKRAVLCGVTYRKKRYRLKGPVNDVANMRELLVKVFDFPTECIHELTEEKQCVNFHPTKTNILRELEWLVEGCQKGDSLVFYFSGHGIQETDSKEDEIDAMDESICPVDFLHEGTILDNELNSILVWPLVEGVTLHVIADTCHSGTVLDLSYVYDPEKFTWKNNKPPSKEPSRKNPSGGRAICVSACQDHQMAADTSAFKGKGMNGVMTYLFTKVIKQKPDITYGGLMEQMGKEIEEIMRNNCRPSFLQHMFRPRIVQDTVISSSEEFDLFGTIFTL 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00684 401 PANTHER METACASPASE-4 123 367 - -
Accr5g00684 401 Gene3D - 63 395 - -
Accr5g00684 401 Pfam Caspase domain 126 373 IPR011600 GO:0004197|GO:0006508
Accr5g00684 401 SUPERFAMILY Caspase-like 129 243 IPR029030 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00684 Accr-Chr5 30270461 30273973 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00684 K22684 - gmx:100796640 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00684 5 30270461 30273973 Accr5g00684 5 30270461 30273973 CCT
Accr5g00684 5 30270461 30273973 Accr5g00684 5 30270461 30273973 ECH