Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr5g00288 ATGTTCAGACTGCTGCCGGCACGATCATTCATCTTTTTAAGACCTGGAAATCCTCATTATATTGCAAAAAGTTGGCATTTGATATCTTCACGTGGAACAATAACAAGAGAAGCTACAGGAGTTAGGATTAAAGTGACTGCACCTTATACTATTTGGAACATGGCAAGCCCAACAAGTTCAATGTCAAAAGCTATACAAGTAGCTGCTGGGGATGAATTGCAACAGGTTAAACTACTAACATCAACCAATGACAAATATGGTGGTGTCATTGTGGAAATGGAAGAGCCTATTGACCCTACAACCTTTATCTCAATTCTCAGAGCTTCAATTTCCCACTGGAAACAGCTGGGTAAGAAGGGTGTTTGGATAAAATTACCTATTCATCTGGTCAACCTCGCTGAACCTCTAGTTAAGGAAGGGTTCTGGTACCACCATGCAGAACCAAAATATTTAATGCTGGTATACTGGATTCCTGAAAGTGCGAACACTATTCCAGCAAATGCCACACACCGAGTGGGTGTTGGTGCATTTGTGATGAATGGAAAACAAGAGGTCCTAGTAGTTCAAGAAAAAAGTGGGCTATTTCAGGGAACTGGAGTCTGGAAATTTCCTACTGGAGTTGTTGATCAGGGAGAAGATATTTGTGAAGCAGCAGTAAGAGAGGTCAAAGAAGAAACAGGAGTTGATTCAGAATTTTTGGAGGTATTAGCGTTCAGACAAAGTCACAAGTCATTCTTTGACAAGTCGGATCTGTTCTTTGTGTGCATGCTGCGCCCACTTTCTTTTGACATTCAAATCCAAGATGTGGAATTAGAGGCTGCTCAGTGGATGCCGTTTGAGGAATATGCAGCTCAGCCGTTTGTCCAGAAGCATCAACTTCTGAAGCACATCAATGATATATGCTGGGAAAAGTTCAACGGACAATATTCTGGATTTAATCATATGCCTGTCTCATCAAATTTTTCTGACAAGCAGAGTTATTTGTACTTCAATTCTGGAGACCTGAAGAGGCATAGTTCTTCATGA 1026 0.4103 MFRLLPARSFIFLRPGNPHYIAKSWHLISSRGTITREATGVRIKVTAPYTIWNMASPTSSMSKAIQVAAGDELQQVKLLTSTNDKYGGVIVEMEEPIDPTTFISILRASISHWKQLGKKGVWIKLPIHLVNLAEPLVKEGFWYHHAEPKYLMLVYWIPESANTIPANATHRVGVGAFVMNGKQEVLVVQEKSGLFQGTGVWKFPTGVVDQGEDICEAAVREVKEETGVDSEFLEVLAFRQSHKSFFDKSDLFFVCMLRPLSFDIQIQDVELEAAQWMPFEEYAAQPFVQKHQLLKHINDICWEKFNGQYSGFNHMPVSSNFSDKQSYLYFNSGDLKRHSSS 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr5g00288 341 CDD Nudix_Hydrolase_12 170 301 - -
Accr5g00288 341 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 167 185 IPR003293 -
Accr5g00288 341 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 255 279 IPR003293 -
Accr5g00288 341 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 151 167 IPR003293 -
Accr5g00288 341 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 129 147 IPR003293 -
Accr5g00288 341 ProSiteProfiles Nudix hydrolase domain profile. 169 301 IPR000086 -
Accr5g00288 341 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 171 311 - -
Accr5g00288 341 ProSitePatterns Nudix box signature. 206 227 IPR020084 GO:0016787
Accr5g00288 341 PRINTS NUDIX hydrolase family signature 215 230 IPR020476 -
Accr5g00288 341 PRINTS NUDIX hydrolase family signature 201 215 IPR020476 -
Accr5g00288 341 PANTHER NUDIX HYDROLASE RELATED 54 338 IPR003293 -
Accr5g00288 341 Pfam NUDIX domain 170 290 IPR000086 -
Accr5g00288 341 Pfam Nudix hydrolase domain 79 157 IPR040618 -
Accr5g00288 341 FunFam Nudix hydrolase 8 171 309 - -
Accr5g00288 341 FunFam nudix hydrolase 2 76 162 - -
Accr5g00288 341 SUPERFAMILY Nudix 137 299 IPR015797 -
Accr5g00288 341 Gene3D - 75 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr5g00288 Accr-Chr5 14708214 14730333 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr5g00288 K26956 - gmx:100819062 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr5g00288 5 14708214 14730333 Accr5g00288 5 14708214 14730333 ECH