Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01743 ATGAGTGCAGTTCCGAAAGAGTCCATTGAAGTCATTGCGCAGAGCATTGGCATCACCAATTTGTCCCCTGATGTCGCTCTCGCTCTAGCTCCCGATGTGGAGTATAGGGTTCGCGAAATTATGCAGGAGTCTATAAAATGCATGCGCCACTCAAAGCGAACCTTTCTTACGTCTGATGATGTGGATAGTGCACTTAAATTGAGAAACCTGGAGCCAGTATATGGTTTCACCTCTAATGATCCTGTGCGGTTCAAGAGAGCTGCTGGACACAAGGATTTGTTCTACATCGATGACAAAGATGTTGATTTTAAGGATGTGATTGAAGCACCACTGCCAAAAGCACCTCTTGATACGTCAATTACTACTCATTGGCTGGCAATTGAAGGTTTACAGCCTGCAATTCCTGAAAATGCTCCCATTGAAGCTCCCTCTGACACAAGAAAATCTGACTATAAGGAAGATGTACTTCCTGTTGATAAATTACCTGTTAGACATGTAATTTCAAGAGAGCTACAGCTTTACTACAACAAGATAACTGAGCTGATATCAAACAAGCCAAGCACCATTCTCCTTGATAGAGCATTAATTAGCTTGGCAACGGATTCAGGGCTCCATCCTTTGATTCCTTATTTCTCACACTTTGTCGATGAGGAGGTGGCTCGGAACTTAAACAATTTAAATCTTTTATTTGCTTTGATGCGTCTTGTTCGGAGCCTTTCTCAAAATCCTCACATACACATAGAGCTTTATTTACATCAACTGATGCCGGCTATTATGACCTGCCTTGTTTCGAAAAGGCTAGGGAATAGACTATCTGATAATCACTGGGAACTCAGGAACTTCACTGCAAACCTGCTTGCTTCAATATGCAAAAGATTTGGGCATGTTTATCATAACCTTCAACCACGTGTGACAAAGACATTGCTTCATGCTTTCTTGGACCCTACTAAATCTCTACCTCAACATTATGGTGCAATTAAAGCGATAGCTGCTCTTGGATCCAACATGGTTCGCTTGCTTATTCTTCCAAATCTTGAGACATATCTGCTTCTTCTTGAGCCAGAAATGCAACTTGAGAAGCAAAAAAACGCATTAAAGAGGCATGAAGCATGGCAAGTTTATGGAGCATTGCTGTGCGCAGCAGGCCAATGTATTCATGAAAGGCGCAAAGTGTACAGCCATATGCTCACTCCTGCTTCTACTCGTGTCCCGACAGTATTGCCAAGCAAACGTAAAGCCAGCACAGACAATCTAATGCAGCAACCTCCACTGAAGAAAATTGCAACAGATGTTTCTGGGGGTTTGATGCCAATAAACTCCTTGCCGGTTGATATGCAAGGCACACCGGGTGGATTTTCCAATTCTATGGGAGTTTCTAACCCCGGCATACCCTCAATGGCTCGCCAGCTAAATCAAGGAAGAGAAGTTGGGGGTCAACAAGGTAAGGTATCGGCAACTCTTGCTCAGGCTTGGAAGGATTACATCGATGCCGGACATTTGTTATCATCTATGCATGAACTATTCGGCCATGGTGTATTGTCCTTTATTCCAAAAGCTGAAGCATCCATATTCTTGTGA 1578 0.4316 MSAVPKESIEVIAQSIGITNLSPDVALALAPDVEYRVREIMQESIKCMRHSKRTFLTSDDVDSALKLRNLEPVYGFTSNDPVRFKRAAGHKDLFYIDDKDVDFKDVIEAPLPKAPLDTSITTHWLAIEGLQPAIPENAPIEAPSDTRKSDYKEDVLPVDKLPVRHVISRELQLYYNKITELISNKPSTILLDRALISLATDSGLHPLIPYFSHFVDEEVARNLNNLNLLFALMRLVRSLSQNPHIHIELYLHQLMPAIMTCLVSKRLGNRLSDNHWELRNFTANLLASICKRFGHVYHNLQPRVTKTLLHAFLDPTKSLPQHYGAIKAIAALGSNMVRLLILPNLETYLLLLEPEMQLEKQKNALKRHEAWQVYGALLCAAGQCIHERRKVYSHMLTPASTRVPTVLPSKRKASTDNLMQQPPLKKIATDVSGGLMPINSLPVDMQGTPGGFSNSMGVSNPGIPSMARQLNQGREVGGQQGKVSATLAQAWKDYIDAGHLLSSMHELFGHGVLSFIPKAEASIFL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01743 525 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 6 2 522 IPR037796 GO:0000124|GO:0005669|GO:0006367|GO:0016251|GO:0046695
Accr4g01743 525 SMART TAF_cls 2 68 IPR004823 -
Accr4g01743 525 SUPERFAMILY ARM repeat 204 382 IPR016024 -
Accr4g01743 525 SUPERFAMILY Histone-fold 2 66 IPR009072 GO:0046982
Accr4g01743 525 FunFam transcription initiation factor TFIID subunit 6 1 66 - -
Accr4g01743 525 CDD TAF6C 164 380 IPR011442 GO:0006367
Accr4g01743 525 Gene3D - 164 368 IPR046344 GO:0006367
Accr4g01743 525 Pfam TATA box binding protein associated factor (TAF) 1 66 IPR004823 -
Accr4g01743 525 FunFam transcription initiation factor TFIID subunit 6 163 368 - -
Accr4g01743 525 Pfam TAF6 C-terminal HEAT repeat domain 258 345 IPR011442 GO:0006367
Accr4g01743 525 Gene3D Histone, subunit A 1 67 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01743 Accr-Chr4 18488362 18496972 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01743 K03131 - qsa:O6P43_021232 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01743 4 18488362 18496972 Accr4g01743 4 18488362 18496972 ECH