Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01676 ATGGATGAAGGTGAGGGAGGGTACGGTGAGAGTGGGGATCCGATGGATCAGTTCCATCGCAACGAAGCGATATCAGCTGTAGCTGATGAGGGTTTTTTGGCCGAAGAGGACGACGATTACGAGGACCTTTATAACGACGTTAATGTCGGGGAAGGGTTTCTTCAGTCTTTAAGGAAGAACGAGGATTCCGGGTTTCGGAATGAGGAGGTTGAGGAGAAAAAGACTCAATCGACTCAATCAGCCCATGTTCCAACGGAAACTGGTGGTGTTTCTATCCCAGGTGTCGGTGTCGGTGGTGGTGGTGGTAGTACTGGTGGTGAGGCTGCCGCTGCGGGGGTTACAGATGCTGCGTCTAGGGTTCCAGGGCGACCAGATGTGGTTCAAAATCAAGGGTTTAGAGGGAATGACATGGGTGTGAAAGGTAGTGGTGGACCGGGTACCTCAATGGGGGCTGGTGGTGGGATGAGGGTTGAATTAGGGCAACAACCGAGCAAATTGAATGAGTTAGAGGAGCAGAGTGCTAATAATAGTGTAGGAGTACAAGGCATGGGGCAACAACCTCATGGTGGAGTTGTTGGGAACGTGGGAAATGAGAATTTGATGAGGCAAGGTGGTGGAGGAGGAAATCTCAACAGGGCTGGCGGCAATGGGGTTGGGAATAATGTGACTGGTGTCAATGTTGTCAGTGCTGGAGGAGGAGCTAATATTCCTGGCGGCGGAGGTGGTGGTGGTGCCGGAAGTGGTGGTGGGGGCACCATTTTATTTGTTGGTGACTTACACTGGTGGACTACTGATGCTGAGTTAGAGGCTGAACTTTGCAAGTATGGGCCAGTGAAGGAGGTGAAATTTTACGATGAGAAGGCTAGTGGGAAGTCAAAAGGGTATTGCCAGGTTGAGTTTTTTGATCCTTCTCATGCATCTTCCTGTAAAGAAGGAATGCATGGGCATTTGTTTAATGGGCGGCCATGCGTTGTTGCTTTTGCCTCTCCTTTTTCTGTTAAGAGAATGGGAGAGGCTCAGGTGAGCAGGAATCAACAGATAGCCCAATCTACTGGTTCTCAGGCAAGGAGGGGACCTGCTGATTCAGGGGCTGGTAAGACGGGTGGGAGTAACATTACTACTGGTGGAAACTACCAAGGTGGAGATGGCAATAGAGGCTATGGGAGAGGTAACTGGGGGAGAGGGAATAATCCTGGGATGGGAAATAGGGGCCCTGTTAATCCAATGAGGAATAGAGGTGGTGGGATGGGGGGTAGAGGCATCATGGGTAATGGTGGGAATGGATTTGGTCAAGGTATTGGTGCCACTCCACCTCTGTTGCATCCTCAGTCAATGATGAATCAGGGCTTTGATCCTGCATTTGGTGGGCCTATGGGTAGAATGGGTGGCTATGGAGGCTTTCCAGGTGCTCCAACTCCTCCATTCTCTGGTATTTTGCCTTCATTCCCTGCAGTTGGAGGTGTTGGTTTGCCTGGAGTAGCACCTCATGTTAATCCAGCCTTTTTTGGCAGAGGGATGCCCATGAATGGTATGGGGATGATGCCCACTTCAACAGTTGATGGGCCTAATATGGGAATGTGGTCAGATCCAAGTATGGGTGGATGGGTTGGTGAAGAGCATGGTGGCGGGAGGGCTGGAGAGTCGAGTTATGGTGAGGAAGCTGCATCAGAACATCAGTATGGTGAGGCGAGTCATGATAGAGGTGGTTGGCCAAATGCCATGAGGGAAAAGGATAGAGGATCAGAAAGGGACTGGTCTGGCTCCTCTGAGCGAAGGTATAAGGATGATAGAGATCAAGGATATGAGAGAGATGCGCCAAGAGAAAAAGAAGTGGGGCAGGACCAGGAATGGTCTGAAAGAAGACATCGTGATGATAGAGAAGTAGTTCGTGAACGTGATAGGGAGCGTGACCGTGATCGTGAACGCTCTCGAGATCGTGACCGTGACCGTGACCGTGAAAGGGATCGTGAAAGGGACCGTGAGCGTGATAGGTACAAGGAAGAAAGGGACAGATATGCTGACCATCATAGGTACAAAGATCGTGAAGCAGACCATGAGGATGAGTGGGAACGGGCACGGTCATCAAGGACTCATAGCAAATCAAGATTATCACAAGAGGACGAGCATCATTCTAGAGCTAGGGATGCTGATTATGGAAAGAGGAGACGTCTTACATCTGAGTAA 2184 0.5027 MDEGEGGYGESGDPMDQFHRNEAISAVADEGFLAEEDDDYEDLYNDVNVGEGFLQSLRKNEDSGFRNEEVEEKKTQSTQSAHVPTETGGVSIPGVGVGGGGGSTGGEAAAAGVTDAASRVPGRPDVVQNQGFRGNDMGVKGSGGPGTSMGAGGGMRVELGQQPSKLNELEEQSANNSVGVQGMGQQPHGGVVGNVGNENLMRQGGGGGNLNRAGGNGVGNNVTGVNVVSAGGGANIPGGGGGGGAGSGGGGTILFVGDLHWWTTDAELEAELCKYGPVKEVKFYDEKASGKSKGYCQVEFFDPSHASSCKEGMHGHLFNGRPCVVAFASPFSVKRMGEAQVSRNQQIAQSTGSQARRGPADSGAGKTGGSNITTGGNYQGGDGNRGYGRGNWGRGNNPGMGNRGPVNPMRNRGGGMGGRGIMGNGGNGFGQGIGATPPLLHPQSMMNQGFDPAFGGPMGRMGGYGGFPGAPTPPFSGILPSFPAVGGVGLPGVAPHVNPAFFGRGMPMNGMGMMPTSTVDGPNMGMWSDPSMGGWVGEEHGGGRAGESSYGEEAASEHQYGEASHDRGGWPNAMREKDRGSERDWSGSSERRYKDDRDQGYERDAPREKEVGQDQEWSERRHRDDREVVRERDRERDRDRERSRDRDRDRDRERDRERDRERDRYKEERDRYADHHRYKDREADHEDEWERARSSRTHSKSRLSQEDEHHSRARDADYGKRRRLTSE 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01676 727 MobiDBLite consensus disorder prediction 340 357 - -
Accr4g01676 727 CDD RRM_CFIm68_CFIm59 254 327 - -
Accr4g01676 727 MobiDBLite consensus disorder prediction 340 413 - -
Accr4g01676 727 MobiDBLite consensus disorder prediction 1 21 - -
Accr4g01676 727 MobiDBLite consensus disorder prediction 114 149 - -
Accr4g01676 727 MobiDBLite consensus disorder prediction 526 727 - -
Accr4g01676 727 MobiDBLite consensus disorder prediction 61 76 - -
Accr4g01676 727 MobiDBLite consensus disorder prediction 558 727 - -
Accr4g01676 727 MobiDBLite consensus disorder prediction 57 94 - -
Accr4g01676 727 Gene3D - 245 371 IPR012677 -
Accr4g01676 727 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 252 330 IPR000504 GO:0003723
Accr4g01676 727 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFIC FACTOR 20 664 IPR034772 -
Accr4g01676 727 MobiDBLite consensus disorder prediction 366 380 - -
Accr4g01676 727 SUPERFAMILY RNA-binding domain, RBD 250 345 IPR035979 GO:0003676
Accr4g01676 727 SMART rrm1_1 253 326 IPR000504 GO:0003723
Accr4g01676 727 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 254 323 IPR000504 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01676 K14398 - qsa:O6P43_013551 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01676 4 17726844 17729027 Accr4g01676 4 17726844 17729027 ECH