Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01478 ATGGCTAATAAGGAAGAGCAAGCCACCAAATCAAGGTTCCGACGCATCTGTGTTTTCTGTGGTAGCAGCCCCGGCAAGAACCCCAGCTACCAGCTCGCTGCTATTCAACTCGCTAAACAACTCGTGGAGAGGAAGATTGATTTGGTTTACGGCGGAGGGAGCATCGGGTTGATGGGTCTCGTCTCTCAAGCCGTCTTCGACGGTGGTCGCCACGTGTTAGGAGTGATCCCCAAGACCCTTATGCCAAGAGAGATCACCGGAGAGACAGTCGGTGAAGTTCGACCCGTATCAGGGATGCACCAGCGTAAGGCCGAAATGGCCCGACAAGCCGATGCCTTCATCGCCCTCCCAGGAGGTTATGGTACCCTGGAGGAGCTATTGGAAGTGATCACCTGGGCTCAGCTGGGAATCCACGAAAAACCCGTGGGCTTGTTGAACGTAGATGGGTATTACAACTCATTGCTTTCATTCATAGATAAAGCTGTGGACGAAGGCTTCGTGACCCCTGCAGCCCGTCACATCATCGTCTCTGCCCAAACTGCCCAGGAGCTCATGTGCAAGCTTGAGGAATACCAGCCCAAGCACCGTGACGAGGCCGCCAAGCTCAGCTGGGAAATGGAGCAACACCTGGTTCCCTCTCAAATCGCCATGTCAGACATTTACCGTTGA 669 0.5411 MANKEEQATKSRFRRICVFCGSSPGKNPSYQLAAIQLAKQLVERKIDLVYGGGSIGLMGLVSQAVFDGGRHVLGVIPKTLMPREITGETVGEVRPVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHEKPVGLLNVDGYYNSLLSFIDKAVDEGFVTPAARHIIVSAQTAQELMCKLEEYQPKHRDEAAKLSWEMEQHLVPSQIAMSDIYR 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01478 222 FunFam CASP-like protein 4 190 - -
Accr4g01478 222 SUPERFAMILY MCP/YpsA-like 12 191 - -
Accr4g01478 222 Pfam Possible lysine decarboxylase 58 187 IPR031100 -
Accr4g01478 222 Gene3D - 2 190 - -
Accr4g01478 222 PANTHER LOG FAMILY PROTEIN YJL055W 6 212 - -
Accr4g01478 222 NCBIfam Rossman fold protein, TIGR00730 family 15 191 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01478 Accr-Chr4 14871188 14872639 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01478 K22522 - tcc:18591534 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01478 4 14871188 14872639 Accr4g01478 4 14871188 14872639 ECH