Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01458 ATGGAGCAACTAACACTATTGTTATCGTCTCTACTAACGCTTCACTTATCCGTATCAGGAGTTGTTTCTACGACATTTACCATGGTTAACAAATGCAGCTACACAGTTTGGCCGGGCATTCTTTCAAACGCCGGAGTTGCTCCTCTTTCCTCCACCGGTTTTGTTCTTCAGACCGGCGAGTCTAAGACCATCTCCCCACCTACTTCCTGGGCTGGCCGCTTCTGGGGCCGAACTCAATGCGCCCAAGACTCCACCGGTAAGTTTACGTGTCTCACCGGTGACTGTGGCTCCGGGAAGGTGGAATGCGGAGGAAAAGGAGCCTCACCGCCGGCGACGTTGGCGGAATTTACTCTAGACGGAGCGGGAGGGCTTGATTTCTTCGATGTGAGCTTGGTAGACGGATACAACGTACCTATGATAGTTGTTCCACAAGGTGGTTCCGGTGACAACTGCACGAGCACGGGATGTGTGGCAGATCTGAACGGCGCGTGTCCTTCAGAGCTCAAGGTGATGAGTGAGGACGGAAGGGAAGGGGTAGCGTGCAAGAGCGCGTGCGAAGCCTTTGGGTCGCCGCAATACTGTTGCAGCGGCGCGTATGGAAATCCAAACACATGCAAACCCTCGTCATACTCGCAGATATTCAAGAACGCATGTCCACGCGCCTACAGCTACGCCTACGACGACAAAACGAGCACGTTTACATGTGCGTCTGCCGATTATACCATCACCTTTTGCCCATCACCAAACACCAGCCAGAAGGCGTCGAACAGCCCATCTGCTCCGGCAGCTCCGAGCTTGCCGACGGTGGACACAAACAGCCCCATGGTGTACCAAGGAGCTGCTTTTGATGAAAGCTTGCTATCAGCCGCCACGTGCTTCCACGTGTACCAATCCAAGATCATTGCCGCGGGCATCGTCACTGTAGCTGTGGCCCTTTGGGGATTCTGA 948 0.5422 MEQLTLLLSSLLTLHLSVSGVVSTTFTMVNKCSYTVWPGILSNAGVAPLSSTGFVLQTGESKTISPPTSWAGRFWGRTQCAQDSTGKFTCLTGDCGSGKVECGGKGASPPATLAEFTLDGAGGLDFFDVSLVDGYNVPMIVVPQGGSGDNCTSTGCVADLNGACPSELKVMSEDGREGVACKSACEAFGSPQYCCSGAYGNPNTCKPSSYSQIFKNACPRAYSYAYDDKTSTFTCASADYTITFCPSPNTSQKASNSPSAPAAPSLPTVDTNSPMVYQGAAFDESLLSAATCFHVYQSKIIAAGIVTVAVALWGF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01458 315 Gene3D Thaumatin 24 246 IPR037176 -
Accr4g01458 315 PANTHER OS03G0233200 PROTEIN 14 246 IPR001938 -
Accr4g01458 315 FunFam THAUMATIN-LIKE PROTEIN 1 24 246 - -
Accr4g01458 315 SUPERFAMILY Osmotin, thaumatin-like protein 24 247 IPR037176 -
Accr4g01458 315 SMART tha2 26 246 IPR001938 -
Accr4g01458 315 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Accr4g01458 315 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Accr4g01458 315 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Accr4g01458 315 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Accr4g01458 315 CDD TLP-PA 25 245 - -
Accr4g01458 315 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Accr4g01458 315 ProSiteProfiles Thaumatin family profile. 23 246 IPR001938 -
Accr4g01458 315 Pfam Thaumatin family 30 246 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01458 Accr-Chr4 14731737 14733926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01458 1 247 Receptor kinase-like Gene Family AT5G38280 55.200 1.25e-95 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01458 - - gmx:100787631 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01458 4 14731737 14733926 Accr4g01458 4 14731737 14733926 ECH