Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01423 ATGGCCTTCATCAATTCCAGATTACGCTTTTGCCATTCTCTCACTCGCACTTCCAAATTCTATTCTTCTTCTTCTTCAGCTTTAGTTTCTGAAGCTACCCTTCAGCAAGACGTCGATGAAACACCCCAAAGCACTTCCTTATCCCCTGAAGAAACCCTTATAGCTGAAAATTTTCATGCTCTAATCAAAGACCATTACCGCAACAACCTTAATCCTAACGCCGCCCCACCCACTCCTCATTTCACAATACCCGATCTCTCCCTCGACTTCTCTCGAATCGCCTCCCACCAACCTCTTTCCCCTTCCGTCGTCCGCCGCGTGCTTGAGAAATGCGGCGGCGTCCGCCATGGTATCCCTTTCCTCCAATCCCTTGCTTTTTTCAATTGGGCCACCACGTGCGAGGGTTTTCCCACCACGCCGGAGCCCTATATCGAGATGGTTGACCTCGCTGGTAAGCTCAGGCACTTCGATTTAGCATGGCATCTCATCGATTTGATGAAATCCAGAGGTGTCCAAATAACCGTCGAGACATTCTCTTTCCTCGTCCGGCGATACGTGAGAGCAGGATTGGCTGCGGAGGCCGTCCACACTTTTAACCGTATGGAAGATTATGGCTGTAAGCCTGACAAGATTGCCTTTTCAATTGTCATTAGTATTTTATGCAAGAAGAGAAGGGCAAGCGAAGCTCAGTCTTTCTTCGATAGCTTGAAGCACAGATTTGAGCCCGATGTCATAGTTTACACCAACCTGATTCGTGGTTGGTGCCGAGCAGGCAATATTTCAGAGGCCGAGCGCGTGTTTGCGGAGATGAAGGATGCTGGAATCAAACCAAATGTTTATACTTACAGCATTGTGATTGACTCACTATGCCGGTGTGGACAAATCACTCGTGCGCATGATGTTTTCTCTGAGATGATAGATGTGGGTTGTGATCCAAATTCCATTACTTTCAACAATCTCATGCGTGTTCATGTCAAAGCTGGAAGAACTGAGAAGGTATTGCAAGTTTATAATCAGATGAAGAGACTTGGATGTCCTCCTAATACTATCACCTATAATTTCCTCATAGAGACGCACTGTAAAGATGATAATCTTGAGGAAGCTATCAAGGTTCTCAACTCAATGGTCAAGAAAGGGTGTGCTCCCAATGCTTCTACTTTCAATCTTATATTCAGATCCGTAGCCAAGTTACATGATATAAATGGTGCTCATAGGCTGTATGCTAAAATGAAGGAACTCAAGTGTGAGCCTAATACCCTGACCTACAATATATTAATGGGCATGTTCACTCATGCGAGATCTACTGATATGGTGCTCAAGATGAAGAAGGAAATGGATGAGAATGAAGTGGAGCCTAATGTAAATACTTATAGGTTGTTGATCACAATGTATTGTGGAATGGGGCACTGGAACAATGCGTACAAGTTGCTGAGAGAGATGGTTGAAGAGAAGTGCATAAAACCGAGTCAGGTGGTTTATGATATGGTTCTGAGCGAGCTGAGGAAGGCAGGACAGTTAAAAAAGCATGAGGAGTTGGTGGATAAAATGGTTGAGAGGGGATTTGTCTCTCGCTCCATATAG 1581 0.4497 MAFINSRLRFCHSLTRTSKFYSSSSSALVSEATLQQDVDETPQSTSLSPEETLIAENFHALIKDHYRNNLNPNAAPPTPHFTIPDLSLDFSRIASHQPLSPSVVRRVLEKCGGVRHGIPFLQSLAFFNWATTCEGFPTTPEPYIEMVDLAGKLRHFDLAWHLIDLMKSRGVQITVETFSFLVRRYVRAGLAAEAVHTFNRMEDYGCKPDKIAFSIVISILCKKRRASEAQSFFDSLKHRFEPDVIVYTNLIRGWCRAGNISEAERVFAEMKDAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDVGCDPNSITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPNTITYNFLIETHCKDDNLEEAIKVLNSMVKKGCAPNASTFNLIFRSVAKLHDINGAHRLYAKMKELKCEPNTLTYNILMGMFTHARSTDMVLKMKKEMDENEVEPNVNTYRLLITMYCGMGHWNNAYKLLREMVEEKCIKPSQVVYDMVLSELRKAGQLKKHEELVDKMVERGFVSRSI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01423 526 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 489 523 IPR002885 -
Accr4g01423 526 Gene3D Tetratricopeptide repeat domain 94 229 IPR011990 GO:0005515
Accr4g01423 526 Pfam PPR repeat family 347 396 IPR002885 -
Accr4g01423 526 Pfam PPR repeat family 242 291 IPR002885 -
Accr4g01423 526 Pfam PPR repeat family 417 465 IPR002885 -
Accr4g01423 526 Gene3D Tetratricopeptide repeat domain 235 306 IPR011990 GO:0005515
Accr4g01423 526 Gene3D Tetratricopeptide repeat domain 307 378 IPR011990 GO:0005515
Accr4g01423 526 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 348 382 IPR002885 -
Accr4g01423 526 Pfam PPR repeat 315 345 IPR002885 -
Accr4g01423 526 SUPERFAMILY TPR-like 207 482 IPR011990 GO:0005515
Accr4g01423 526 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 383 417 IPR002885 -
Accr4g01423 526 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 453 487 IPR002885 -
Accr4g01423 526 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 418 452 IPR002885 -
Accr4g01423 526 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 278 312 IPR002885 -
Accr4g01423 526 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 174 208 IPR002885 -
Accr4g01423 526 PANTHER OS03G0856100 PROTEIN 143 383 - -
Accr4g01423 526 NCBIfam pentatricopeptide repeat 421 454 IPR002885 -
Accr4g01423 526 NCBIfam pentatricopeptide repeat 245 279 IPR002885 -
Accr4g01423 526 NCBIfam pentatricopeptide repeat 315 349 IPR002885 -
Accr4g01423 526 NCBIfam pentatricopeptide repeat 386 419 IPR002885 -
Accr4g01423 526 NCBIfam pentatricopeptide repeat 177 209 IPR002885 -
Accr4g01423 526 NCBIfam pentatricopeptide repeat 280 313 IPR002885 -
Accr4g01423 526 NCBIfam pentatricopeptide repeat 456 486 IPR002885 -
Accr4g01423 526 NCBIfam pentatricopeptide repeat 350 384 IPR002885 -
Accr4g01423 526 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 243 277 IPR002885 -
Accr4g01423 526 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 313 347 IPR002885 -
Accr4g01423 526 Pfam Pentatricopeptide repeat domain 162 220 IPR002885 -
Accr4g01423 526 Gene3D Tetratricopeptide repeat domain 387 525 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01423 134 521 Glycosyltransferase AT1G05670 26.221 3.70e-48 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01423 - - qsa:O6P43_016313 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01423 4 14331212 14332792 Accr4g01423 4 14331212 14332792 ECH