Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g01314 ATGGCTGATCATCACCAACAGAGAATTCACCCAGTCCAAGATGTGGAGGCATCACCATACACACCATCAGCACCACTGTTCCCAAGGAACGCGTCAAAGTCCGACCATGGAGTACCGGCAGCGGGGCAACCCCAGCCGGTTCCGAAGAAAAGAAGATCAAGAAGCTGTTGCTGCAAGTTTCTGTGCTGGACCATAAGCCTTCTTCTGATACTCATAGTAGCAATAGGCATAACCGTAGGAATTCTCTTCCTTGTGTTCAGGCCAAAGCTTCCCAAATATTCAATAGACGAACTTAGAGTAGCTCAATTGAGTATTTCACAAGACAACAATCTCTCTGCAACTTTCAATGTGACACTCACAGCAAGAAACCCAAACAAGAGGATAGGAATATACTATGAAGGAGGAAGCCATGTGAGTGCTTGGTACAATGACACAAAGTTATGTGAAGGGTCATTGCCAAAGTTTTATCAGGGTCACAGGAACATAACAGTGCTTCATTTGCCTCTTTCTGGGCAAATACAGAATGCAACTGGGTTCCAAAGTGCGATTCAGGATCAGATGCAGAAGGCTGGGAATATTCCTCTGAATCTTAGGGCAAAGCAACCCGTGAGGGTGAAGCTTGGGAAATTGAAACTGTTCAAAGTGAAGTTCAGGGTTAGTTGCAGGCTTGTGGTGGATAGATTGGAAAGTAATAATAAGATTAAGATTGTAAGTAGCAGCTGTAAGTTCAGGCTTAGGCTGTGA 744 0.4462 MADHHQQRIHPVQDVEASPYTPSAPLFPRNASKSDHGVPAAGQPQPVPKKRRSRSCCCKFLCWTISLLLILIVAIGITVGILFLVFRPKLPKYSIDELRVAQLSISQDNNLSATFNVTLTARNPNKRIGIYYEGGSHVSAWYNDTKLCEGSLPKFYQGHRNITVLHLPLSGQIQNATGFQSAIQDQMQKAGNIPLNLRAKQPVRVKLGKLKLFKVKFRVSCRLVVDRLESNNKIKIVSSSCKFRLRL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g01314 247 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 25 229 - -
Accr4g01314 247 MobiDBLite consensus disorder prediction 1 20 - -
Accr4g01314 247 Pfam Late embryogenesis abundant protein 118 222 IPR004864 -
Accr4g01314 247 MobiDBLite consensus disorder prediction 26 51 - -
Accr4g01314 247 SUPERFAMILY LEA14-like 73 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g01314 Accr-Chr4 12878163 12878906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g01314 49 247 EF-hand Containing Proteins AT5G21130 29.146 4.09e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g01314 - - gmx:100778798 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01314 4 12878163 12878906 Accr4g01314 4 12878163 12878906 ECH