Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00962 ATGAAATCCTTGTTCAATTGGTCGGGGAAAGAGCCTCCCCGAGGGACTCCTGTTGTGGTGAAGATGGAGAACCCCAATTGGTCCATGGTTGAGCTTGAAGGTCCTTCAGAAGAAGAATTCCTCGTTAGCAACTCTTCGAGTTATCCAAGAGACAAGGGCAGAGGCAGAAATGCGAGGCAACTCACATGGGTTCTTCTTCTCAAAGCTCACAGAGCTGCCGGTTGCCTGACCTACATTCCGTCCGCATTGTTGGGCCTAGCCTCAGCTGTGAAGCGTCGAGTAGCTTCTGGAAGAACCGACGCCGATGCCGACAACGTAAACGAAATCCGTGGCGGCAGGGAAAAAGAGAACCCCACTGTGAGAAGCAGGTTTTATACATTTATAAAATTGTTCCTATGGCTTTCAGTGCTTTTGTTGTGTTTTGAGGTGGCTGCCTACTTTAAAGGTTGGCATTTTCGTGCGCCTCATTTCCAAATTGATTATACGTGGGTAGCCTCACTTGGTGTTAGAGATGTTTTCGATTGGCTGTATTCACGATGGGTCTTGTTTCGGGTGGCCTATCTTGCTCCTCCTCTGCAACTCCTGGCCAATGTATGTATTGTGCTATTCCTTATTCAGAGTCTGGATAGATTAATTCTATGTCTCGGAATGTTCTGGATTCGCCTTAAGAAGATCAAGCCTGTTCCTAAAGAAGGTGCGGTAGATCTTGAGTCCGGTGAGAAAGGTTTCTTCCCTATGGTGTTAGTGCAGATCCCCATGTGTAACGAGAGAGAGGTTTATCAACAATCAATTGCTGCTGCTTGTAATTTGGATTGGCCAAAACACAAGTTGCTAATACAAGTTCTTGATGATTCTGATGACCCGAACACGCAATTTCTGATCAATGAAGAGGTCCAAAAATGGCAGCACGAGGGTGCCAACATTTTGTACCGGCATCGGGTGCTAAGAGACGGATACAAGGCTGGTAATCTCAAGTCTGCCATGAATTGTAGCTATGTCAAAGACTATGAATTCGTTGCTATTTTCGATGCTGATTTTCAACCAACCCCAGATTTCCTGAAGAGAACAGTTCCTCATTTCAAGGACAATGAGGAAGTAGGACTAGTTCAAGCAAGATGGTCCTTCGTGAACAAGGATGAGAACCTGCTAACAAGGTTGCAGAACATAAACCTGGCATTCCATTTTGAGGTGGAACAGCAGGTAAATGGCGTTTTCATTAATTTCTTCGGATTCAATGGAACTGCTGGAGTGTGGAGAATCAAGGCATTGGAGGAATCTGGTGGGTGGTTAGAGAGGACCACGGTTGAGGACATGGACATTGCTGTTCGGGCTCATCTTCATGGCTGGAAATTTATTTATCTCAATGACGTTGAGTGCCAATGTGAAGTACCAGAGTCTTATGAAGCTTACAGGAAACAACAACACAGGTGGCATTCTGGCCCAATGCAACTATTCCGCCTTTGTTTGCCTGACATCATAAAATCTAATATAAGCTTATGGAAGAAATTCAATTTGATCTTTCTCTTCTTTCTTCTAAGAAAACTGATATTGCCCTTCTATTCATTTACCCTATTCTGTATAATTCTGCCTATGACCATGTTTGTTCCAGAGGCTGTGCTTCCTGAATGGGTTGTATGTTATATCCCAGCAATCATGTCATTTCTTAACATCCTTCCGGCCCCAAAATCCTTTCCCTTCATTGTACCCTACCTTCTTTTTGAGAACACCATGTCTGTTACTAAATTCAATGCCATGATCTCTGGCCTACTTCAGCTCGGTAGTGCATATGAGTGGATTGTGACTAAGAAATCCGGTCGTTCCTCTGAGGGTGATCTTGTTGCATTGGTTGAGAAATCCCCTAGGCATCAAAGAGGGGCATCAGTGCCTGATCTTGAGGAAATGAAGGAGGTAATCCTGCGAGAGGAGGAAAAAGCAACTAAGAAGAAGCATAACAGAATATACATGAAGGAGCTTTCTTTGGCCTTTCTTCTTTTAACGGCATCAGCAAGGAGTCTTCTGTCTGCTCAGGGAATCCACTTCTACTTCTTGCTTTTCCAAGGAATATCCTTCCTGTTAGTTGGTCTAGACTTGATTGGGGAACAGGTTGACTGA 2112 0.4437 MKSLFNWSGKEPPRGTPVVVKMENPNWSMVELEGPSEEEFLVSNSSSYPRDKGRGRNARQLTWVLLLKAHRAAGCLTYIPSALLGLASAVKRRVASGRTDADADNVNEIRGGREKENPTVRSRFYTFIKLFLWLSVLLLCFEVAAYFKGWHFRAPHFQIDYTWVASLGVRDVFDWLYSRWVLFRVAYLAPPLQLLANVCIVLFLIQSLDRLILCLGMFWIRLKKIKPVPKEGAVDLESGEKGFFPMVLVQIPMCNEREVYQQSIAAACNLDWPKHKLLIQVLDDSDDPNTQFLINEEVQKWQHEGANILYRHRVLRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNEEVGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLHGWKFIYLNDVECQCEVPESYEAYRKQQHRWHSGPMQLFRLCLPDIIKSNISLWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAVLPEWVVCYIPAIMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLLQLGSAYEWIVTKKSGRSSEGDLVALVEKSPRHQRGASVPDLEEMKEVILREEEKATKKKHNRIYMKELSLAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00962 703 Coils Coil 631 651 - -
Accr4g00962 703 Pfam Glycosyl transferase family group 2 339 533 IPR001173 -
Accr4g00962 703 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 238 464 IPR029044 -
Accr4g00962 703 FunFam probable xyloglucan glycosyltransferase 5 238 463 - -
Accr4g00962 703 SUPERFAMILY Nucleotide-diphospho-sugar transferases 247 526 IPR029044 -
Accr4g00962 703 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 179 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00962 Accr-Chr4 9158391 9160917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr4g00962 14 703 Miscellaneous Gene Families AT4G07960 77.618 0.0 1049
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00962 - - qsa:O6P43_015951 1201.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00962 4 9158391 9160917 Accr4g00962 4 9158391 9160917 ECH