Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00939 ATGGCCTCAGAAGCACAACTTCATGGTCTAAGTGCTGCAGAATTTGCAGTACTTGAGCCTATCATCAACAAATATCACAAATTTGAAGCTGGTCCAAACACATGCACTTCCATCATAACGCAGCGAATCGAGGCTCCGGCGGGAACTGTGTGGGGTTTCATTCGGAGCTTCGAGAACCCTCAGAAATACAAGCACTTCATCAAGAGCTGCAACATGAAAGGTGACGGCGGTGTCGGTAGCATCCGAGAGGTCACGGTGGTTTCCGGTCTCCCGGCGTCCACCAGCACCGAGAGGCTCGAGATCTTAGACGATGACAACCACATACTCAGCTTTAGGGTTGTGGGTGGCCAGCACCGTCTCAAAGATTATCGCTCCGTTACGTCGGCGAATGAGTTTCAGGCGGAGGACGGCAAGGTGTACACTATGGTGGTGGAGTCGTATATTGTGGACATACCACCGGGGAATACTGCAGAAGATACGAAGATGTTCACGGACACTGTGGTGAGGCTCAACCTTCAGAAACTTTCCCTCCTTGCCATCTCAACCCTCCACGCACAACATTAG 564 0.5142 MASEAQLHGLSAAEFAVLEPIINKYHKFEAGPNTCTSIITQRIEAPAGTVWGFIRSFENPQKYKHFIKSCNMKGDGGVGSIREVTVVSGLPASTSTERLEILDDDNHILSFRVVGGQHRLKDYRSVTSANEFQAEDGKVYTMVVESYIVDIPPGNTAEDTKMFTDTVVRLNLQKLSLLAISTLHAQH 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00939 187 CDD PYR_PYL_RCAR_like 35 175 - -
Accr4g00939 187 PANTHER - 34 176 - -
Accr4g00939 187 SUPERFAMILY Bet v1-like 35 175 - -
Accr4g00939 187 Pfam Polyketide cyclase / dehydrase and lipid transport 40 173 IPR019587 -
Accr4g00939 187 Gene3D - 1 187 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00939 Accr-Chr4 8951913 8952476 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00939 K14496 - gmx:100778183 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g00927 3 10349352 10349915 Accr4g00939 4 8951913 8952476 CCT
Accr4g00939 4 8951913 8952476 Accr4g00939 4 8951913 8952476 ECH