Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00883 ATGAGCTTAATCCAGAAAGGATCCCAACCAGAAACAAAGCTAAGCTCCCCAAACAAGGTAACTACTTTGAACCCAAATGCTGCGGAATTTGTTCCTTTTGCCCTCAGATCAGTGCCATCTGGAAGTACCAGCTCCGTAGATGCAACAGCAAGGTTTCCTACTGCTGGAGCTCTTGGGAAAGCAGTTTTAGATCGATCAGAGTCATCCATTTCAAATAATTCTGATGATGAGGTCCACCAATACTGGCGTTGTCAACTCCCTGATGATATCACCCCTGACTTTAAGGTCATGGGAGAGGATGATCCCCAAGGTCTTAACAATCTCTCTTTAGCGGGCTTGTCTATACATGATGATCAAGAAGCGCCAAGGGAGGACCCATCTTCAGCAAATTTTCTGAACTCATTAACAAAGCGTTGGGATATGCAAATTGGGAGTACCAACCAGCATTTTGGCAGTGGTCGAGAGGGGCTTACTTATGATGATAACTCTGGACATGGATTCTTGAATGATCTTTTGAGTGAACAAGCTATAACGGATGATACTGATATGAACCCTTTGGAGTTTTTGGCTGCTCAGTTCCCTGGTTTTGCTTCAGAAAGCCTCGCAGAAGTTTACTTTGCTAATGGATTTGATTTGAATCTGACCATTGAGATGCTTACTCAGTTGGAGCTTCAAGTTGATTGCACTTTCAATCAGAATCTGAATTCAAAGACTGTTTCAGCTCCCAACCTGAGTGCAATGGACTTCCCTGCACTTACTTCACCTGATGGCCACAATACTTCTGTTAAATATGCTGCAGACAATGTTCAGCAAAGCGGCAATCCTTATGGATCATCTGACAAGGACATGCTTCTATTTAAGTCTAGCTCTTCAATTCCTTCTAGAGGTGCTATTGACTTTGCTTCTGCTGTCAGGAAATTGGCTTCCCAGGACTCTGGTATTTGGAAGTATGATAAAAATGATTCTGGTGATGCCACTATTGGCTCAAGTAGAAGTTCTCATGCTCTAGCTCATGCGTATAATGGTGGTCAGGGAAGAGCGAGCTTTGGTGATAGGTTGACAACTCGCGGTTCAACTCGAGCAGCTCCTGTTTGGCTTGAAACTGGTGATGCAGTTGCAAATATGTATTCTGAACTGCGGGAGGGGGCTCGTGATCATGCACGGTTGCGTAATACATATTTTGAGCAGGCACGACAAGCATACCTCATTGGAAATAAGGCTTTAGCAAAGGAACTGAGTGTTAAAGGGCATCTGCACAACTTTCACATGAAAGCAGCTCATGGAAAGGCTCAAGAATCTATTTACCGGCAGAGGAATCCTGTTTCTCCAGAGATGCAGGGCAACGGAAGAGGACATGAAAGAATGATAGACCTACATGGACTACATGTTAGTGAAGCCATTCATGTGCTAAAACATGAATTGAGTGTGCTAAGAACCACCGCCAGAGCCGCCGACCAGCGCTTGCAGGTTTATATATGTGTTGGCACTGGTCATCATACCCGGGGTTCCCGCACTCCGGCAAGACTTCCAGTAGCTGTACAGCGTTATCTACTTGAGGAAGAGGGTCTTGAATACAAGGAACCACAGCCAGGCCTGCTTCGAGTGGTGGTATAG 1614 0.4511 MSLIQKGSQPETKLSSPNKVTTLNPNAAEFVPFALRSVPSGSTSSVDATARFPTAGALGKAVLDRSESSISNNSDDEVHQYWRCQLPDDITPDFKVMGEDDPQGLNNLSLAGLSIHDDQEAPREDPSSANFLNSLTKRWDMQIGSTNQHFGSGREGLTYDDNSGHGFLNDLLSEQAITDDTDMNPLEFLAAQFPGFASESLAEVYFANGFDLNLTIEMLTQLELQVDCTFNQNLNSKTVSAPNLSAMDFPALTSPDGHNTSVKYAADNVQQSGNPYGSSDKDMLLFKSSSSIPSRGAIDFASAVRKLASQDSGIWKYDKNDSGDATIGSSRSSHALAHAYNGGQGRASFGDRLTTRGSTRAAPVWLETGDAVANMYSELREGARDHARLRNTYFEQARQAYLIGNKALAKELSVKGHLHNFHMKAAHGKAQESIYRQRNPVSPEMQGNGRGHERMIDLHGLHVSEAIHVLKHELSVLRTTARAADQRLQVYICVGTGHHTRGSRTPARLPVAVQRYLLEEEGLEYKEPQPGLLRVVV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00883 537 CDD CUE_CID7_like 184 225 IPR041806 -
Accr4g00883 537 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 123 537 - -
Accr4g00883 537 SUPERFAMILY SMR domain-like 454 536 IPR036063 -
Accr4g00883 537 SMART SMR_2 453 537 IPR002625 -
Accr4g00883 537 MobiDBLite consensus disorder prediction 1 22 - -
Accr4g00883 537 ProSiteProfiles Smr domain profile. 456 537 IPR002625 -
Accr4g00883 537 SMART DUF1771_2 375 440 IPR013899 -
Accr4g00883 537 Pfam Domain of unknown function (DUF1771) 376 439 IPR013899 -
Accr4g00883 537 Pfam Smr domain 456 525 IPR002625 -
Accr4g00883 537 Gene3D - 423 537 IPR036063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr4g00883 Accr-Chr4 8373398 8376616 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00883 - - gmx:100796128 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g00883 4 8373398 8376616 Accr4g00883 4 8373398 8376616 ECH