Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr4g00859 ATGAAGATCGCAGTGGAGGGTTGCATGCATGGTGATCTCGATAATGTCTACAAAACTATTCAACGTCTTGAAAAAGTAAACAACACCAAAATCGACCTCCTCCTCTGCTGCGGCGATTTTCAGGCTGTCCGAAACGAAGAAGATTTGAAGAGCTTGAATGTGCCGCCGCGCTATCGCTCCATGAATTCATTCTGGAAGTACTATTCGGGATTGGAGGTTGCCCCGTATCCGACAATATTCATTGGTGGAAACCACGAAGCATCTAATTATCTGTGGGAATTGTACTATGGAGGATGGGCTGCGCCTAATATATATTTCTTGGGAGCTGCGGGGGTGGTCAGGTTTGGGAATATCCGAATCGGTGGAGTGTCTGGGATTTATAATGCCCGTCATTATAAGTCAGGACATTTTGAGAGGCCTCCTTATGATCAAAGTACGATCAGGTCTGTGTATCATGTTCGTGAATATGATGTTCACAAGCTCATTCAAGTTGAGGAACCGGTTGATATCTTTCTTTCGCATGACTGGCCAGTGGGAATCACTGATTACGGGAATTGGAAGGATCTCATTCAGCGCAAACATTTTTTTAAGCAGGAGATAGAGGAAAGAAGGCTTGGGAGTAAAGCTGCTGCACAACTCCTGGAAAAATTGAAACCACGGTATTGGTTTTCAGCTCACTTACACTGCAAGTTTGCTGCTCTTGTTCAACATGGGGATGGTGGTCCTCAGACAAAATTTCTTGCACTTGATAAGTGCATTGCCGGTCGGGATTTCTTACAGATCGTGGAAATTGAATCAGGGGCAGGACCTTATGAAATTCAGTATGATGAAGAATGGTTAGCTATAACACGAAGGTTCAACTCTGTCTTCCCTCTAACTGCCAAAGCTGCAGATTTCAAAGGTATAGATCTTGAGATGGAGGACTGTCGTCAATGGGTTAGAAGTAGGCTTCAAGAGAGAGGGTACAAGCCTTTTGAATTTGTTAGAACTGCTCCATGTTACAATCCTTCTCAATCCAATGTTGAGGGTACCTTTGCTGTGAATCCTCGAAATCCACAGACAGAATCTCTTTTGCAGCTCCTAGGACTTCCGTATCTTCTTGATGGCATTCCTGAACCACAGGGCTTATCACCTTATCCTTCTCCTTCAATTCAAGGAGGTCCCACTGGTTACGACAGCGAGGACATTCCGATTGAAGATGTTGATGATGTGGGTGATGATGAATGA 1227 0.4442 MKIAVEGCMHGDLDNVYKTIQRLEKVNNTKIDLLLCCGDFQAVRNEEDLKSLNVPPRYRSMNSFWKYYSGLEVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGAAGVVRFGNIRIGGVSGIYNARHYKSGHFERPPYDQSTIRSVYHVREYDVHKLIQVEEPVDIFLSHDWPVGITDYGNWKDLIQRKHFFKQEIEERRLGSKAAAQLLEKLKPRYWFSAHLHCKFAALVQHGDGGPQTKFLALDKCIAGRDFLQIVEIESGAGPYEIQYDEEWLAITRRFNSVFPLTAKAADFKGIDLEMEDCRQWVRSRLQERGYKPFEFVRTAPCYNPSQSNVEGTFAVNPRNPQTESLLQLLGLPYLLDGIPEPQGLSPYPSPSIQGGPTGYDSEDIPIEDVDDVGDDE 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr4g00859 408 Gene3D - 8 249 IPR029052 -
Accr4g00859 408 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Accr4g00859 408 Pfam Lariat debranching enzyme, C-terminal domain 243 364 IPR007708 GO:0006397|GO:0016788
Accr4g00859 408 CDD MPP_Dbr1_N 3 259 IPR041816 -
Accr4g00859 408 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 404 - -
Accr4g00859 408 MobiDBLite consensus disorder prediction 372 408 - -
Accr4g00859 408 FunFam Lariat debranching enzyme 9 251 - -
Accr4g00859 408 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
Accr4g00859 408 SUPERFAMILY Metallo-dependent phosphatases 1 235 IPR029052 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr4g00859 K18328 - gmx:100812726 712.99